| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0493 |
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| Symbol | rpsC |
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| ID | 5193159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 569178 |
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| End bp | 569864 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640584947 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_001265847 |
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| Protein GI | 148545745 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000464846 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.111354 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTCAGA AAGTACATCC CACTGGCATT CGCCTGGGAA TCGTCAAGGA GCACACCTCC
GTCTGGTACG CAGACGGTGC TACTTACGCA GATTACCTGT TGAAGGATCT GAAAACGCGT
GAGTACCTCC AAGACAAACT AAAAAGCGCG TCCGTAAGCC GTATCGATAT TCATCGTCCG
GCTCAAACTG CACGCATCAC CATCCACACC GCTCGTCCCG GTATCGTTAT CGGTAAGAAA
GGTGAAGATG TCGAGAAGCT GCGTCAGGAC CTGACCAAGC AGATGGGTGT GCCTGTGCAC
ATCAACATCG AAGAGATCCG CAAGCCGGAA CTCGACGCTA TGCTGGTTGC GCAGAGCGTA
GCTCAGCAGC TGGAACGCCG TGTAATGTTC CGTCGCGCCA TGAAGCGCGC GGTACAGAAC
GCCATGCGTA TTGGTGCCAA GGGCATCAAG ATCCAGGTGA GCGGTCGTCT CGGCGGTGCT
GAGATTGCTC GTACCGAGTG GTATCGCGAA GGTCGTGTGC CTCTGCACAC CCTGCGTGCC
GATATCGACT ACAACACCTA CGAAGCTCAC ACCACTTACG GTGTGATCGG TGTGAAGGTT
TGGATCTTCA AAGGCGAAGT TATTGGTGGT CGCCAAGAAG AACTGAAACC ACAAGCACCA
GCGCCTCGTA AAAAAGCTGC TAAGTAA
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| Protein sequence | MGQKVHPTGI RLGIVKEHTS VWYADGATYA DYLLKDLKTR EYLQDKLKSA SVSRIDIHRP
AQTARITIHT ARPGIVIGKK GEDVEKLRQD LTKQMGVPVH INIEEIRKPE LDAMLVAQSV
AQQLERRVMF RRAMKRAVQN AMRIGAKGIK IQVSGRLGGA EIARTEWYRE GRVPLHTLRA
DIDYNTYEAH TTYGVIGVKV WIFKGEVIGG RQEELKPQAP APRKKAAK
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