Gene Pput_0489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0489 
SymbolrplW 
ID5193773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp567390 
End bp567689 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content50% 
IMG OID640584943 
Product50S ribosomal protein L23 
Protein accessionYP_001265843 
Protein GI148545741 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0089] Ribosomal protein L23 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000019112 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.107844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGG AACGCGTATT CAAAGTCCTC CTTGGCCCGC ACGTTTCCGA GAAGGCTACC 
GTTCTGGCTG AGAAAAAAGG CCAGTTCGTA TTCAAGGTTG CTACTGATGC AACCAAGCTG
GAAATCAAGA AAGCTGTCGA AGGCCTGTTC AACGTAAAAG TTGAAAACGT GTCGACTGTT
AACGTTCTGG GTAAAACCAA GCGTACCGCA CGTGGTCTGG GCAAGCGTAA TGACTGGAAG
AAGGCGATCG TCTCCCTTCA GCCAGGCCAA GATCTCGATT TCAGCAGCAG TGCTGAGTAA
 
Protein sequence
MNQERVFKVL LGPHVSEKAT VLAEKKGQFV FKVATDATKL EIKKAVEGLF NVKVENVSTV 
NVLGKTKRTA RGLGKRNDWK KAIVSLQPGQ DLDFSSSAE