| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0468 |
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| Symbol | |
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| ID | 5192199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 536428 |
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| End bp | 537849 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640584912 |
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| Product | peptidase M23B |
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| Protein accession | YP_001265822 |
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| Protein GI | 148545720 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases
[COG3061] Cell envelope opacity-associated protein A |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000910103 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00126388 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCAACG AACCGCCTAA AGCGCCCCCG CTTTATCCGA AGAGCCATCT GTTGGCCGCC
AGCGGCATCG CCGCCCTGCT CAGCCTGGCT TTGCTGGTAT TTCCTTCCAG CGAAGTGGAA
GCCAAGAAAA CTACCCTCAA CCTCGAGCTC GAAAGCCCTG CCGAGCAGCT GAAAGACGAA
TCCCGCGCCG CGCCCCTGGT GCAAAGCGAA GGTGAGCAAG GCTCGCCTTT CGCCCAGATC
GAAGAGGCTA CCCCCGAAAC CCAGAAGGCC GATCAGCAGG CCCCGGCCGC CGAACCGGTT
GCCGAGGCCG CCAAGGAGCC TGGCCACCGC GAAGTCACCG TGGCCCGCGG CGATACCCTG
TCCACCCTGT TCGCCAAGGT CGGCCTGCCC GCCAATGCTG TGCATGACTT GCTGGCCAGC
AACAAGCAGG CCAAGCAGTT CAGCCAGCTC AAGCACGGCC AGGTCTTGCA ATTCGAGCTC
GACAAGGATG GCCAGCTGGC CAGTCTGCAC AGCAAAGTCA GCAACCTCGA AACCATTCGC
CTGACCAAAA CCGCCAAGGG CTACACATTC AACCGTGAAA TCAGCAAGCC GGTGATACGC
ACCGCCTATG CCCACGGCGT GATCAAGAGC TCGCTGTCTG CTTCCGCCCA GCGCGCCGGC
CTGTCCCACA GCATGACCAT GGACATGGCC CGCGTGCTGG GTTACGACAT CGACTTCGCC
CAGGATATTC GCCCAGGGGA CGAGTTCGAC GTGGTCTACG AACAGAAGGT GATGGACGGC
AAGGTCGTCG GCACCGGTAA CATCCTCTCT GCGCGCTTCA CCAACCGCGG CAAAACCTAC
ACTGCCGTGC GCTACACCAA CAAGCAGGGC AACACTACCT ACTACACCGC CGACGGCAAC
AGCCTGCGCA AGGCCTTCAT CCGTACCCCG GTGGACTTCG CCCGCATCAG CTCGCGCTTT
TCCGCCGGTC GCAAGCACCC CATCCTGAAC AAGATCCGCG CCCACAAAGG CGTCGACTAC
GCGGCCCCAC GAGGTACGCC GATCAAGGCA GCCGGTGACG GTCGCATCGA ACTGGCCGGG
CGCCGTGGTG GCTACGGCAA TACCGTGATC ATTCAGCATG GCAACCGCTA CAAAACGCTG
TATGGCCACA TGCAGGGCTT TGCCAAAGGC ATCAAGACCG GCAGTACGGT CAAACAGGGC
CAGATCATTG GCTACATCGG CACTACCGGC CTGTCCACCG GACCACACCT GCACTACGAG
TTCCAGGTCA ACGGCGTGCA CGTCGACCCG CTGAGCCAGA AGGTGCCAAT GGCTGACCCG
ATTGCCAAGA ACGAGCGTCA GCGCTTCCTG CAGCAGAGCC AGCCGCTGAT TGCCCGCATG
GATCAGGAAA AGGCCACCCT GCTCGCAGCG AACAAGCGCT AA
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| Protein sequence | MTNEPPKAPP LYPKSHLLAA SGIAALLSLA LLVFPSSEVE AKKTTLNLEL ESPAEQLKDE
SRAAPLVQSE GEQGSPFAQI EEATPETQKA DQQAPAAEPV AEAAKEPGHR EVTVARGDTL
STLFAKVGLP ANAVHDLLAS NKQAKQFSQL KHGQVLQFEL DKDGQLASLH SKVSNLETIR
LTKTAKGYTF NREISKPVIR TAYAHGVIKS SLSASAQRAG LSHSMTMDMA RVLGYDIDFA
QDIRPGDEFD VVYEQKVMDG KVVGTGNILS ARFTNRGKTY TAVRYTNKQG NTTYYTADGN
SLRKAFIRTP VDFARISSRF SAGRKHPILN KIRAHKGVDY AAPRGTPIKA AGDGRIELAG
RRGGYGNTVI IQHGNRYKTL YGHMQGFAKG IKTGSTVKQG QIIGYIGTTG LSTGPHLHYE
FQVNGVHVDP LSQKVPMADP IAKNERQRFL QQSQPLIARM DQEKATLLAA NKR
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