Gene Pput_0466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0466 
Symbol 
ID5191887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp534875 
End bp535273 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content59% 
IMG OID640584910 
Productiron-sulfur cluster insertion protein ErpA 
Protein accessionYP_001265820 
Protein GI148545718 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.147286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00198975 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCGTCA TCGAGTTTTA TGGCGGCTAC CGCGCCGGGA GAATCAACAT GAGCGTCGAA 
ACCTTCACCC CTACCGGTCT GGAATTTACC CACGGGGCAG CCCAGAAGGT GAAGAACCTG
GTCAATGAGG AAGGCAATGA GCGTCTGAAG CTGCGAGTGT TCGTTACCGG TGGCGGTTGC
TCCGGCTTCC AGTACGGCTT CACCTTCGAT GAAGACGTGG CCGAAGATGA CACCATTGTC
GAGCGCGAGG GCGTTTCCCT GGTGGTCGAC CCGATGAGCT TCCAGTACCT GGCGGGTGCC
GAAGTGGACT ACCAGGAAGG CCTGGAAGGT TCGCGGTTCG TGATCAAGAA CCCGAATGCC
GCGACCACCT GCGGTTGCGG GTCTTCGTTC TCGATCTAA
 
Protein sequence
MRVIEFYGGY RAGRINMSVE TFTPTGLEFT HGAAQKVKNL VNEEGNERLK LRVFVTGGGC 
SGFQYGFTFD EDVAEDDTIV EREGVSLVVD PMSFQYLAGA EVDYQEGLEG SRFVIKNPNA
ATTCGCGSSF SI