Gene Pput_0464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0464 
Symbol 
ID5192170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp533173 
End bp533598 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content59% 
IMG OID640584908 
Producthypothetical protein 
Protein accessionYP_001265818 
Protein GI148545716 
COG category[S] Function unknown 
COG ID[COG1981] Predicted membrane protein 
TIGRFAM ID[TIGR00701] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00424113 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTTTACC TATGGATCAA AGCGCTGCAT ATCGTCAGCG TGGTCTGCTG GTTCGCCGGC 
CTGTTCTACC TGCCCAGGTT GTTCGTCTAC CACGCCCAGA GCCAGGACAG CATCAGCCAG
GAACGCTTTG CGACCATGGA GCGCAAGCTG TACCGCGGCA TCATGAATCC GGCGATGATC
GCCACCTACG TTTTTGGCGC CTGGATGCTG TACCTCACCC CCGGCTGGCT GAGCCAGGGG
TGGCTGCATG CCAAGCTCAC CCTGGTGATC CTACTGACCG GCTACCATCA CGTGTGCGGT
GCCCAGCGCA AACGCTTCGC CAATGGCACC AACACCCGCA GCCACGTCTA CTATCGCTGG
TTCAACGAAG TGCCCGTGCT GATCCTGCTG GGTATCGTCA TTCTGGTGGT GGTGAAACCG
TTCTGA
 
Protein sequence
MLYLWIKALH IVSVVCWFAG LFYLPRLFVY HAQSQDSISQ ERFATMERKL YRGIMNPAMI 
ATYVFGAWML YLTPGWLSQG WLHAKLTLVI LLTGYHHVCG AQRKRFANGT NTRSHVYYRW
FNEVPVLILL GIVILVVVKP F