| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0463 |
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| Symbol | |
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| ID | 5192169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 532188 |
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| End bp | 533144 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640584907 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_001265817 |
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| Protein GI | 148545715 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00575132 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGCTAC CTGCCTCGCT CGAACAACGC CTGCGGCTGC CCGTGGTTGC CGCGCCGATG
TTCCTCATCT CCAACCCCCA ATTGGTGCTG GCCTGCTGCG CCAGCGGCGT GGTTGGCAGT
TTCCCGGCAC TGAACCAACG CGACAGCGCT GGCTTCAAGG CTTGGCTGGA AGAGATCGAG
GCAGGCCTGG CTCAACTGCA GGCGCCAGCG CCCTACGCCG TCAACCTGAT CGTCCACCCG
ACCAACCCGC GCCTGCAGGC CGACTTGGCC TTGTGCGTCG CACACCGTGT ACCAATCGTT
ATCACCAGCC TGGGGGCAGT AAAGGAAGTG GTCGATGCCG TACACGGCTA CGGCGGCCTG
GTGCTCCACG ATGTCACCAC CCGCCGGCAT GCCGAAAAAG CCGCCGAAGC GGGTGTCGAT
GGCCTTATCG CCGTCGCCGC AGGCGCAGGC GGCCATGCCG GCACCTGGAG CCCGTTCGCC
CTGGCCGCAG AAATTCGCCA GTTCTTCGAC AAGACCCTGC TGCTGGCTGG TTGCATTAAC
CACGGCCACG AAATCCTGGC CGCACAACTG CTGGGGGCGG ACTTGGCGTA CATGGGCACG
CGCTTCATCG CCACCACAGA AAGCCAGGCT CAGGGCGCCT ACAAACAGAT GCTGCTGGAT
GCCCATGCCG CCGACATCAT CCACACACCC GTGGTGTCCG GCATCCCCGC CAGCTTCCTG
CGCCAGAGCC TGGAGCAGGC CGGCTACGAC ATGAACGCCC TCAAAGGCGG GCAGGTGCAA
GGCAAGCTCA AGCCGATCGA TGACGAAGCC AAGGCCTGGA AGACCGTATG GTCAGCGGGC
CAGGGCGTCG GTGCAATCCA TGACCTGCCC AGCGCCAGCG CATTGATCGA GCGCCTGCAT
GGCGAGTACC GACAAGCCCT GGAACGCTGC CAGGTTTTGC GCGCCCGCGC CTTGTAG
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| Protein sequence | MSLPASLEQR LRLPVVAAPM FLISNPQLVL ACCASGVVGS FPALNQRDSA GFKAWLEEIE
AGLAQLQAPA PYAVNLIVHP TNPRLQADLA LCVAHRVPIV ITSLGAVKEV VDAVHGYGGL
VLHDVTTRRH AEKAAEAGVD GLIAVAAGAG GHAGTWSPFA LAAEIRQFFD KTLLLAGCIN
HGHEILAAQL LGADLAYMGT RFIATTESQA QGAYKQMLLD AHAADIIHTP VVSGIPASFL
RQSLEQAGYD MNALKGGQVQ GKLKPIDDEA KAWKTVWSAG QGVGAIHDLP SASALIERLH
GEYRQALERC QVLRARAL
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