| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0461 |
|---|
| Symbol | |
|---|
| ID | 5191106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 530936 |
|---|
| End bp | 531274 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640584905 |
|---|
| Product | histidine triad (HIT) protein |
|---|
| Protein accession | YP_001265815 |
|---|
| Protein GI | 148545713 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00989065 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGACGATC TATTCCTCAA AATCATCAAC CGGGAAATCC CGGCAGATAT CATCTATGAA
GACGACCAGA TCCTGGCCTT CAAGGACATT GCACCCGCGG CACCGGTACA TTTTCTGGTC
ATCCCGAAAA AGCACATTCG CACCCTCAAT GACCTGACCG AAGAAGACAA GGCCCTGGCT
GGCCACATCC TGTTCACCGC CCAGCGCCTG GCTGTCGAAC AAGGCTGCGA GGAAGGTTTC
CGCGTGGTCA TGAACTGCAA CCCCAAAGGC GGCCAGACTG TCTACCACAT CCATATGCAC
GTGCTTGGCC AGCGCCAGAT GAACTGGCCA CCGGGCTGA
|
|---|
| Protein sequence | MDDLFLKIIN REIPADIIYE DDQILAFKDI APAAPVHFLV IPKKHIRTLN DLTEEDKALA
GHILFTAQRL AVEQGCEEGF RVVMNCNPKG GQTVYHIHMH VLGQRQMNWP PG
|
|---|
| |