Gene Pput_0457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0457 
Symbol 
ID5193695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp527837 
End bp528508 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content58% 
IMG OID640584901 
ProductcAMP-regulatory protein 
Protein accessionYP_001265811 
Protein GI148545709 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.89409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.110467 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGTA TCGAACAGGA TTTCGTGATG GTCGCCTCTG CCCTACCCGC CAAGATCAAG 
AACATCGACA AACTGCTGGT GCATTGCCAG CGCCGCCGCT ACACCGCCAA AAGCAACATC
ATCTGCGCCG GCGACCGGGC CGAAACACTG TCGTTCATCA TCAAGGGTTC GGTAACCATC
ATCATCGAGG ACGACGACGG CCATGAAATG ATCATCGCCT ACCTCAACCA TGGCGATTTC
TTTGGCGAGT TAGGCCTGTT CGAGCCCGTT GATGGCGAGC AGCAGCGCAG TGCCTGGGTA
CGCGCCAAGA CCGAATGCGA AGTGGCCGAA ATCAGCTACG AAAAGTTTCG CGAACTGGCG
CGCCAGGACC CTGAAATCCT CTACGCCCTG GGCAGTCAAA TGGCCCAGCG CCTGCGCAAC
ACTACGCGCA AGGTTGGCGA TTTGGCATTT TTCGACGTAA CCGGGCGAGT TGCCCGTTGC
CTGCTGGAAC TGTGCAAGCA GCCCGACGCC ATGACCCACC CCGATGGCAT GCAAATCAAG
ATTACCCGTC AGGAAATCGG CCGAATCGTC GGTTGCTCTC GGGAAATGGT CGGCCGCGTT
CTCAAGGACC TCGAGGAACG CAGCCTGGTG CAGGTCAAGG GCAAGACCAT GGTGGTCTAC
GGTACCCGCT AG
 
Protein sequence
MPRIEQDFVM VASALPAKIK NIDKLLVHCQ RRRYTAKSNI ICAGDRAETL SFIIKGSVTI 
IIEDDDGHEM IIAYLNHGDF FGELGLFEPV DGEQQRSAWV RAKTECEVAE ISYEKFRELA
RQDPEILYAL GSQMAQRLRN TTRKVGDLAF FDVTGRVARC LLELCKQPDA MTHPDGMQIK
ITRQEIGRIV GCSREMVGRV LKDLEERSLV QVKGKTMVVY GTR