Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0449 |
Symbol | |
ID | 5195479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 518963 |
End bp | 519637 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640584893 |
Product | ribulose-phosphate 3-epimerase |
Protein accession | YP_001265803 |
Protein GI | 148545701 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.402606 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCCT ACGCTATTGC CCCCTCCATT CTCTCTGCCG ATTTTGCCCG CCTGGGTGAG GACGTCGACA AGGTATTGGC TGCGGGTGCA GACATCGTCC ACTTCGATGT CATGGACAAT CACTATGTCC CCAACCTGAC CATCGGTCCG ATGGTTTGCA CCGCTCTGCG CAAGTACGGC GTTACTGCGC CGATCGACGT GCACCTGATG GTCAGCCCGG TTGACCGCAT CATTGGCGAC TTTATCGAAG CGGGTGCCAC CTACATCACC TTCCACCCTG AAGCCACGCA GCACATCGAC CGTTCGCTTC AGCTGATCAA GGATGGTGGT TGCAAGGCCG GCCTGGTGTT CAACCCGGCC ACCAGCCTGG ACGCCCTGAA GTATGTGATG GACAAGATCG ACATGGTGCT GCTGATGAGC GTCAACCCAG GCTTCGGCGG GCAGAAGTTC ATCCCCGGCA CCCTCGACAA GCTGCGCGAA GCGCGTGCGC TGATCGACGC CAGTGGCCGT GATATCCGTC TGGAGATCGA TGGTGGCGTG AACGTCAACA ACATCCGCGA GATCGCTGCC GCTGGCGCCG ATACCTTCGT GGCCGGCTCG GCGATCTTCA ACGCCCCGGA CTACCAGGAA GTGATCGCCA AGATGCGCGC CGAACTGGCC CTGGCCCGCC CATGA
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Protein sequence | MQPYAIAPSI LSADFARLGE DVDKVLAAGA DIVHFDVMDN HYVPNLTIGP MVCTALRKYG VTAPIDVHLM VSPVDRIIGD FIEAGATYIT FHPEATQHID RSLQLIKDGG CKAGLVFNPA TSLDALKYVM DKIDMVLLMS VNPGFGGQKF IPGTLDKLRE ARALIDASGR DIRLEIDGGV NVNNIREIAA AGADTFVAGS AIFNAPDYQE VIAKMRAELA LARP
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