| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0446 |
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| Symbol | |
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| ID | 5192269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 515633 |
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| End bp | 516667 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640584890 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001265800 |
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| Protein GI | 148545698 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.45407 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGC AGTTGAAACT GACCGCCCTG GCTTTGGGGC TGTTCACCGC TGGCCAGGCC
ATGGCCGCAG ACCTCACCGT GATCTCGTTC GGGGGCGCCA ACAAGGCTGC CCAGGTCAAA
GCGTTCTACG AACCCTGGGA AAAAGCGGGT AATGGCAAGA TTGTCGCGGG TGAGTACAAC
GGCGAAATGG CCAAGGTCAA GGCGATGGTC GACACCAAGA GTGTGTCGTG GAACCTGGTA
GAGGTTGAGT CGCCAGAGCT GGCGCGCGGC TGCGACGAGG GCATGTTCGA AGAGCTCGAC
CCAGCCCTGT TCGGCAATGA GGCCGACTAC GTGCCTGGTG CCATTCAGCC TTGCGGCGTG
GGCTTCTTCG TCTGGTCCAC GGTCATGGCC TACAACGCCG ACAAGCTCAA GACCGCCCCC
ACCAGCTGGG CCGATTTCTG GGACACCAAG CAGTTCCCGG GCAAGCGCGG CCTGCGCAAG
GGCGCCAAGT ACACAATGGA ATTTGCACTG ATGGCCGACG GCGTTGCGCC CAAGGACGTC
TACAAAGTGC TCGCAACCAA GGAAGGCCAG GACCGCGCCT TCAAGAAACT CGACGAACTC
AAGCCCAGCA TCCAGTGGTG GGAAGCGGGT GCACAGCCAC CGCAGTTCCT GGCCTCTGGC
GACGTGGTCA TGAGCTCTGC CTACAACGGC CGTATTGCCG CTGTGCAGAA AGAGAGCAAC
CTCAAGGTGG TGTGGAACGG CGGCATCTAC GACTTCGATG CATGGGCAAT TCCTAAAGGC
GCCAAAAACG TCGAAGAGGC GAAGAAGTTC ATCGCCTACA GCGTCAAGCC CGAGCAGCAG
AAGATCTACT CCGAAAACAT CGCCTATGGC CCGGCCAACT CCAAGGCCGT GAGCCTGCTG
TCGGACGACG TGAAGAAAGA CATGCCGACC ACGCCTGAGA ACATTGCCAA CCAGGTGCAG
ATCGACGTGG CGTTCTGGGC CGACAACAGC GAGCAGCTGG AGCAACGCTT CAACGCCTGG
GCGGCGAAGA AGTAA
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| Protein sequence | MRKQLKLTAL ALGLFTAGQA MAADLTVISF GGANKAAQVK AFYEPWEKAG NGKIVAGEYN
GEMAKVKAMV DTKSVSWNLV EVESPELARG CDEGMFEELD PALFGNEADY VPGAIQPCGV
GFFVWSTVMA YNADKLKTAP TSWADFWDTK QFPGKRGLRK GAKYTMEFAL MADGVAPKDV
YKVLATKEGQ DRAFKKLDEL KPSIQWWEAG AQPPQFLASG DVVMSSAYNG RIAAVQKESN
LKVVWNGGIY DFDAWAIPKG AKNVEEAKKF IAYSVKPEQQ KIYSENIAYG PANSKAVSLL
SDDVKKDMPT TPENIANQVQ IDVAFWADNS EQLEQRFNAW AAKK
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