| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0445 |
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| Symbol | |
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| ID | 5193728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 514468 |
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| End bp | 515592 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640584889 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001265799 |
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| Protein GI | 148545697 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.467134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGG CGAAGTCGAA CGCTGCAACC GGCGAAACGC TGGTCAGCTT CCGTGGTGTG
CAGAAGAGCT ACGACGGCGA GTCGCTGATC GTCAAAGACC TCAACCTGGA TATCCGCAAG
GGCGAGTTCC TCACCCTGCT TGGCCCGTCC GGCTCGGGCA AGACCACCAG CCTGATGATG
CTGGCGGGCT TCGAGACCCC CACCGCCGGT GAAATCCAGC TTGGCGGCCG CTCGATCAAC
AACGTGCCGC CGCACAAGCG TGATATCGGC ATGGTGTTCC AGAACTACGC GCTGTTTCCG
CACATGACCG TGGCTGAGAA CCTGGCCTTT CCGCTGACCG TGCGCAACCT GAGCAAGACC
GACATCAGCG AGCGGGTCAA ACGTGTGCTG AACATGGTCC AGCTCGACGC TTTCGCCAAA
CGCTACCCCG GCCAGCTGTC TGGCGGCCAG CAGCAGCGTG TGGCGCTGGC CCGGGCATTG
GTGTTCGAGC CGCAACTGGT GCTGATGGAC GAGCCACTTG GCGCGCTGGA CAAGCAGCTG
CGCGAACACA TGCAAATGGA GATCAAGCAC ATTCACCAGC GCCTGGGTGT GACCGTGGTG
TACGTGACCC ACGACCAGGG CGAAGCGCTG ACCATGTCTG ACCGCGTGGC GGTGTTCCAC
CAGGGCGAAA TCCAGCAGAT CGCCGACCCG CGCACGCTGT ACGAAGAGCC TTGCAACACC
TTCGTCGCCA ACTTCATCGG CGAGAACAAC CGCATTAGCG GCACCCTGCT GGCCAGCGAT
GGCAAACGTT GCCAGGTGCA GTTGCCTCGC GGTGAGCGGG TCGAGGCGCT GGCGGTGAAT
GTCGGCCAGG CCGGCGAGCC GGTGACCCTG TCGATACGCC CGGAGCGCGT GCGTCTGAAC
GGCCACAGTG AAAGCTGCGT GAACCGGTTC TCTGGCCGGG TGGCCGAATT CATTTACCTG
GGCGACCACG TGCGGGTGCG TCTGGAGGTT TGCGGCAAAG GCGACTTCTT CGTGAAGCAG
CCTATTGCCG AGCTCGACCC GGCGTTGGCC GTGGGCGATG TGGTACCGCT GGGCTGGGAG
GTGGAGCACG CCCGCGCGCT CGATCCGATT GCCGAAGCCC ATTGA
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| Protein sequence | MSEAKSNAAT GETLVSFRGV QKSYDGESLI VKDLNLDIRK GEFLTLLGPS GSGKTTSLMM
LAGFETPTAG EIQLGGRSIN NVPPHKRDIG MVFQNYALFP HMTVAENLAF PLTVRNLSKT
DISERVKRVL NMVQLDAFAK RYPGQLSGGQ QQRVALARAL VFEPQLVLMD EPLGALDKQL
REHMQMEIKH IHQRLGVTVV YVTHDQGEAL TMSDRVAVFH QGEIQQIADP RTLYEEPCNT
FVANFIGENN RISGTLLASD GKRCQVQLPR GERVEALAVN VGQAGEPVTL SIRPERVRLN
GHSESCVNRF SGRVAEFIYL GDHVRVRLEV CGKGDFFVKQ PIAELDPALA VGDVVPLGWE
VEHARALDPI AEAH
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