| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0443 |
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| Symbol | |
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| ID | 5193308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 511145 |
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| End bp | 513532 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640584887 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001265797 |
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| Protein GI | 148545695 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.351986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGAG TGCGTCGCCT GTTGGTTATC GGCTGCTTGT GGCTGCCCTT GATTGCCTGG
GCCAAGCCCG AGGCGCTGCC CTCTGTGGTG CTGGAGCCTG ACCAGCAGCA GTGGCTGGAC
ACCCACCGCA GCCTGCGTGT CGGCTTGGTG TTGCAGGCGC CCTACGCCCA GTTCGACCGG
CGTCTGCAGC AACTGTACGG GGCCAATGTG GAGCTGGTGA ACAGCCTGGC GCAGGCGCTG
CGGCTGGACC TCACCTGGCG TAACTTCAGT GACCAAGCCA GTTTGGAACA TGCCCTGCAA
AGCGGCGAAA TCGACTTCGC CCCTGGCCTT ACCCAGACGC CGGCCAGCCT GCGCCTGTGG
CTATTTAGCG ACCCGTACAT GCGCGTGCCA CAGCTGGTGG TGGGGCCGCG CACCGGGGCC
ATGGCCGTGG AGCTGGAAAA GCTTGAAGCC GAGCAACGCG TGGCGGTGCG CATGCCCAGC
CCGCTGGCGG ATTACCTGCG CGGCAACTAC GGCAACCTCA ACCTGCAGGG GGTGCCCGAC
GATCGTGAGG CCTTGCAACT GGTGGTAGGC GGCCAGGCCA GTTTCGCCGT GCTGGATGAA
GCGCAGCTCA GCCGCCTGTC GCGCGAGAGC GAGTTCGGTG AGCTGGCGGT GGTCGGCGAT
ATTGGCCTGC CGCAGCTGTT GCGTATCGGT TCGCGGCGCG ACTGGCCGCT GCTGGCCGAT
GTACTTGAAC GTGGCTTGCA GGCCGTGCCG GCCAAGGAGC TGGAACAACT GCATCAACGC
TGGTTGCAGC CGAAGTACCC GCGCCTGAGC GAGTCGCCGG GCTTCTGGCA GAACATGGCC
TTGCTGTTCG GTCTGTTGCT GTTGTGTGCC TTGGCCACGC TGGTGTGGCA ACGCCGTCAG
CAGCGCCAGC TGGAGCGCAG CCTGTTGGCC GCGCGGGAAA GCCTTGTTGA GCGCCAGGTG
CGCGAAGAGG CGTTGCGCCT GAGCCAGTTC GCCATCGATC AGAGCACCGT GGGTATCCTC
TGGGTCAACT GGGATAGCCA TGTGCGTTAC GCCAACCATG CCGCCGAGCG CATGTTGGGC
TACAGCGAAG GGGCGTTGCT GGAGCGGCCG CTGAGCGACT TCGAGCCGAG CCTGAACATG
GACCGTTGGC TAGAGCTGTG GAAGGGGGCG CGGACAGGGG CGGGGGGTGT CGGTCAGTTT
GAGACGCAAT GCCGGCGGGC TGATCAAAGC TTGCTACCCG TGGAGCTGTC GCTGAGCTTT
CTGCGCTTTC GTGATTCCGA ATATCTGGTG GTCTACCTCG CCGATGTCAC CGAACGCCAC
CGTGCCCTGG CGGCCCTTCG CGAAAGCGAG GCGCGGCTCA AGGGCATTGC TGGCAACGTA
CCAGGGTTGG TGTTTCGCCT GGAACGTGAC CCGGCCGAGG GCGATCTGGA GTTCCCCTAT
ATCAGTGAGG GTAGCGAGGC TTTGGTAGGT TATGCACCCA GCGAGATCCA GCACCCGCAG
ATGGGCCTGC GCAACCTGGT GCACCCCGAG GACCGTGCTG ATTATCACCG GGTTCAGGAC
CTGGCCCTGG CCAGCGACCA GGACTGGTCC TGGCAGGGGC GCATCCTCAC CCGGCAGGGC
GAACAGCGCT GGGCCGATAT CAAGGCCAGC GCCCGGCATC TGGGCAACGG CCAGGTGGTG
TGGGACGGTG TAGTCTGGGA CATCACACAG GGCAAGCGGG CCGAGCTGGC GCTGGCAAAG
TCCCAGGAGC AGCTGCGCGA ACTCTCGGCC CACCTGGAGA GCGTGCGTGA AGAAGAAAAA
GCCCGTATCG CCCGGGAAGT GCATGATGAG CTGGGGCAGA TGCTGACCGT GCTCAAGCTG
GAAGTGTCGA TGTGCGAGCT GGCCTATGCC GAGCTGGACC CTGGCCTGAA TGATCGCCTG
GCGAGCATGA AACGCCTGAT TGCCCAGTTG TTCCAGTTGG TCCGCGATGT CGCCACTGCC
TTGCGTCCGC CGATCCTCGA TGCCGGCATT GCCTCGGCCA TCGAATGGCA GGCGCGGCGT
TTCGAGGCAC GCACGCAAAT CCCCTGTCTG GTGCAAGTAC CCGATAATCT GCCAGCATTG
AGTGATGCCA AGGCCACCGG GCTGTTTCGT ATCCTCCAGG AGGCGCTGAC CAATGTGATG
CGTCACGCCC AGGCGCACAG CGTAGAGATT GAGCTGGTAC GTGAGGGCGG ACAGTTGCGC
ATGACGGTCA GTGATGATGG CCAAGGCTTT TGCCGCGAGC AGACCCGGCC TACCTCGTTT
GGCCTGGTGG GTGTGCGCGA GCGGGTGCTG ATGCTGGGGG GGAGCATGAC GCTGGAAAGC
GAGCCGGGCG AAGGCACCAG CCTGAGCGTG GCCATTCCGT TGGAGTAG
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| Protein sequence | MKRVRRLLVI GCLWLPLIAW AKPEALPSVV LEPDQQQWLD THRSLRVGLV LQAPYAQFDR
RLQQLYGANV ELVNSLAQAL RLDLTWRNFS DQASLEHALQ SGEIDFAPGL TQTPASLRLW
LFSDPYMRVP QLVVGPRTGA MAVELEKLEA EQRVAVRMPS PLADYLRGNY GNLNLQGVPD
DREALQLVVG GQASFAVLDE AQLSRLSRES EFGELAVVGD IGLPQLLRIG SRRDWPLLAD
VLERGLQAVP AKELEQLHQR WLQPKYPRLS ESPGFWQNMA LLFGLLLLCA LATLVWQRRQ
QRQLERSLLA ARESLVERQV REEALRLSQF AIDQSTVGIL WVNWDSHVRY ANHAAERMLG
YSEGALLERP LSDFEPSLNM DRWLELWKGA RTGAGGVGQF ETQCRRADQS LLPVELSLSF
LRFRDSEYLV VYLADVTERH RALAALRESE ARLKGIAGNV PGLVFRLERD PAEGDLEFPY
ISEGSEALVG YAPSEIQHPQ MGLRNLVHPE DRADYHRVQD LALASDQDWS WQGRILTRQG
EQRWADIKAS ARHLGNGQVV WDGVVWDITQ GKRAELALAK SQEQLRELSA HLESVREEEK
ARIAREVHDE LGQMLTVLKL EVSMCELAYA ELDPGLNDRL ASMKRLIAQL FQLVRDVATA
LRPPILDAGI ASAIEWQARR FEARTQIPCL VQVPDNLPAL SDAKATGLFR ILQEALTNVM
RHAQAHSVEI ELVREGGQLR MTVSDDGQGF CREQTRPTSF GLVGVRERVL MLGGSMTLES
EPGEGTSLSV AIPLE
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