| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0436 |
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| Symbol | pdxA |
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| ID | 5192704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 502343 |
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| End bp | 503332 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640584880 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_001265790 |
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| Protein GI | 148545688 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.350931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCCCC TGCGCTTCGC CGTCACCCCC GGCGAGCCGG CCGGCATAGG CCCCGACCTG
TGCCTGCTGC TCGCCGCAGA CGCCCAGCCC CACCCCCTGA TCGCCATCAC CAGCCCTGAC
CTGCTCGCCG AGCGGGCCAC GCAGCTGGGG CTGGCCGTCA GCCTGCTGCC GGTAGCCCCG
GGCCAATGGC CTGACCTCCC GGCACCCGCA GGTAGCCTGT ACGTCTGGGA TACCCCCTTG
GCGGCTCCGG TGGTGCCAGG CCAGCTCGAC AAGGCCAACG CAGCGTTCGT GCTGGAAACC
CTGACCCGCG CTGGCCAAGG TTGCCTGGAC GGCCACTTCG CCGGGATGAT CACGGCCCCG
GTTCACAAGG GTGTGATCAA CGAAAGCGGT ATCGCCTTTT CCGGGCATAC CGAATTCCTT
GCCGAACTGA CCCGCACCGC ACAAGTGGTA ATGATGCTGG CCACCCGCGG CCTGCGCGTG
GCCCTGGTGA CCACGCACCT GCCACTGCGT GATGTTGCCG ACGCTATCAC TGCAGAGCGC
GTTGAACGTG TAACCCGTAT CCTGCATGCC GACATGCGCG ACAAGTTCGG CATTGCCAAC
CCGCGTATCC TCGTGTGCGG CCTCAACCCG CACGCGGGCG AGGGCGGCCA CCTGGGCCGC
GAAGAAATCG ACATCATCGA GCCGACCTTG GCCCGCCTGC GCACCGAAGG CATGGACCTG
CGCGGGCCGC TGCCGGCCGA TACCCTGTTT ACCCCCAAAT ATCTGGAGCA CTGCGATGCG
GTGCTGGCGA TGTACCACGA CCAGGGCCTT CCCGTACTCA AGTACAAAGG CTTCGGCGCT
GCAGTGAACG TGACCCTGGG CCTGCCAATC ATCCGCACGT CGGTTGACCA CGGCACCGCC
CTGGACCTGG CCGGCACTGG CAAAGTCGAC ACCGGCAGCC TGCGCGTCGC ACTGGAAACC
GCCTACCAGA TGGCCGAGAA CCGACCATGA
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| Protein sequence | MKPLRFAVTP GEPAGIGPDL CLLLAADAQP HPLIAITSPD LLAERATQLG LAVSLLPVAP
GQWPDLPAPA GSLYVWDTPL AAPVVPGQLD KANAAFVLET LTRAGQGCLD GHFAGMITAP
VHKGVINESG IAFSGHTEFL AELTRTAQVV MMLATRGLRV ALVTTHLPLR DVADAITAER
VERVTRILHA DMRDKFGIAN PRILVCGLNP HAGEGGHLGR EEIDIIEPTL ARLRTEGMDL
RGPLPADTLF TPKYLEHCDA VLAMYHDQGL PVLKYKGFGA AVNVTLGLPI IRTSVDHGTA
LDLAGTGKVD TGSLRVALET AYQMAENRP
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