| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0414 |
|---|
| Symbol | |
|---|
| ID | 5195325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 478721 |
|---|
| End bp | 479329 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640584860 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001265771 |
|---|
| Protein GI | 148545669 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAG CCGAAATAAA ACGTCTTGCC GGATACCACC TTCTAAAACA AGAAGGTACG
GACGTTGTTT TTTTTGAATA TACATTTCAC TTCGGCCGTC GCCGTGCAGA TATAATTTCT
GCAGAAGACG GGATGATCAT CGGATACGAA ATCAAATCCG CCCACGACCG AATAGACCGA
CTATCAGAGC AGCTTAGATC ATACGAGCAA CTATTCGACT ATGTCTATGT CGTATGCGAT
ACCAAACATC TTTCTGCCAT ACGGAAAATA GCTCCTGAAA AAATTGGTAT CTATCTATGC
TCATCTGGCG GCGTGAAACG TCTACGGAAA GCAAAGCAAA TTAGAAACTC AAACACAATT
GTAACGTTAG ACGCGATGCC TATTGAAACG TTACGCAGAG AATTTAAAAT AGTAAGAAAA
TCAAAACTTG AAACTTGCGA GTCCATTTCT CGCACTCACA AGAAAGAAGA AATCAAAACC
ATCTTCAGGC GACACATCAT CCAAAAGTAT GGCAGCCAGA CCAGCCACAT GAAAAGCGAG
ACCAGTGAAC TACTTACCCT AGATGATGTA TTCTCTTTAG GCTTAGCCCC TAACAGATTA
GACTCGTAG
|
|---|
| Protein sequence | MKEAEIKRLA GYHLLKQEGT DVVFFEYTFH FGRRRADIIS AEDGMIIGYE IKSAHDRIDR
LSEQLRSYEQ LFDYVYVVCD TKHLSAIRKI APEKIGIYLC SSGGVKRLRK AKQIRNSNTI
VTLDAMPIET LRREFKIVRK SKLETCESIS RTHKKEEIKT IFRRHIIQKY GSQTSHMKSE
TSELLTLDDV FSLGLAPNRL DS
|
|---|
| |