Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0408 |
Symbol | |
ID | 5195256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 474365 |
End bp | 474826 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640584854 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001265765 |
Protein GI | 148545663 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.185418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGATG CCCGCTCCAT CACGCTGGAT GAAATCGATC GCCAGCTGAT CGCCCTGCTG CAGATCAACG CCCGCGAAAG CGTCGCCACC CTCGCCCGCC AGTTGGGCAT CGCCCGCACG ACCGTCAATT CGCGCCTGGA GCGGCTGGAG AAAAACAAGG TTATCTCCGG CTATGGCGTA CGCCTTGGCC AGAGTGTGAT AGGCGGCGGG TTGCAGGCGT ATGTCGGGAT CAAGGTGCAG CCACGCTCCG GCAAGGACGT GGTGCGGCGC CTGAGTGCCA TGGGCCAGGT GCAGCAGCTG TGTGCGGTAA GCGGCGAATT CGACTATGTG GCCTGGCTGC GTACGGACTC GCCCGAGCAG CTGGATCAGT TGCTCGACCA GATTGGCAGT GTCGACGGGG TGGAGAAAAC CACCACGTCG ATCATTCTCA GCAGCAAGGT GGACCGTGGA CAGCCGCTTT GA
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Protein sequence | MSDARSITLD EIDRQLIALL QINARESVAT LARQLGIART TVNSRLERLE KNKVISGYGV RLGQSVIGGG LQAYVGIKVQ PRSGKDVVRR LSAMGQVQQL CAVSGEFDYV AWLRTDSPEQ LDQLLDQIGS VDGVEKTTTS IILSSKVDRG QPL
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