Gene Pput_0408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0408 
Symbol 
ID5195256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp474365 
End bp474826 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content63% 
IMG OID640584854 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001265765 
Protein GI148545663 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.185418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGATG CCCGCTCCAT CACGCTGGAT GAAATCGATC GCCAGCTGAT CGCCCTGCTG 
CAGATCAACG CCCGCGAAAG CGTCGCCACC CTCGCCCGCC AGTTGGGCAT CGCCCGCACG
ACCGTCAATT CGCGCCTGGA GCGGCTGGAG AAAAACAAGG TTATCTCCGG CTATGGCGTA
CGCCTTGGCC AGAGTGTGAT AGGCGGCGGG TTGCAGGCGT ATGTCGGGAT CAAGGTGCAG
CCACGCTCCG GCAAGGACGT GGTGCGGCGC CTGAGTGCCA TGGGCCAGGT GCAGCAGCTG
TGTGCGGTAA GCGGCGAATT CGACTATGTG GCCTGGCTGC GTACGGACTC GCCCGAGCAG
CTGGATCAGT TGCTCGACCA GATTGGCAGT GTCGACGGGG TGGAGAAAAC CACCACGTCG
ATCATTCTCA GCAGCAAGGT GGACCGTGGA CAGCCGCTTT GA
 
Protein sequence
MSDARSITLD EIDRQLIALL QINARESVAT LARQLGIART TVNSRLERLE KNKVISGYGV 
RLGQSVIGGG LQAYVGIKVQ PRSGKDVVRR LSAMGQVQQL CAVSGEFDYV AWLRTDSPEQ
LDQLLDQIGS VDGVEKTTTS IILSSKVDRG QPL