| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0406 |
|---|
| Symbol | |
|---|
| ID | 5194723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 471561 |
|---|
| End bp | 472355 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640584852 |
|---|
| Product | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
|---|
| Protein accession | YP_001265763 |
|---|
| Protein GI | 148545661 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCG CTCTGTACCA GGGCGCACCC AAGCCACTGG ATGTGCCCGG CAACCTGCAA
CGGCTGCGCC ACCAGGCGCA GTTGGCAGCC GAACGCGGCG CACAGTTGCT GGTGTGCCCG
GAGATGTTCC TGACCGGCTA CAACATCGGC CTGGCCCAGG TCGAGCGCCT GGCCGAGGCC
GCCGATGGCC CGGCAGCCAT GACCGTGGTA GAGATCGCCC AGGCGCACCG CATCGCCATT
GTCTATGGCT ACCCGGAGCG CGGCGACGAC GGGGCGATCT ACAACAGCGT GCAGTTGATC
GATGCGCATG GTCGCAGCCT GAGCAATTAC CGCAAGACGC ACCTGTTCGG TGAACTGGAC
CGCTCGATGT TCAGCCCAGG TGCCGACCAC TTCCCGGTGG TGGAACTGGA AGGCTGGAAG
GTTGGCCTGC TGATCTGCTA CGACATCGAG TTCCCGGAGA ACGCCCGACG CCTGGCGCTG
GACGGCGCCG AGCTGATCCT GGTGCCGACG GCGAACATGA CGCCGTACGA CTTTACCTGT
CAGGTGACCG TGAGGGCACG GGCGCAGGAA AACCAGTGCT ACCTGGTATA TGCCAACTAC
TGCGGCGCGG AAGACGAGAT CCAGTATTGC GGGCAGAGCA GCATCATCGG CCCGGATGGC
AGCTTGCTGG CCATGGCCGG GCGGGATGAG TGCCAGTTGT TGGCAGAGCT GGAACATGAG
CGGGTGGTGC AGGGGCGCAC GGCGTTTCCC TACCTGACCG ATTTGCGCCA GGAGCTGCAC
CTGCGTAAAG GCTGA
|
|---|
| Protein sequence | MRIALYQGAP KPLDVPGNLQ RLRHQAQLAA ERGAQLLVCP EMFLTGYNIG LAQVERLAEA
ADGPAAMTVV EIAQAHRIAI VYGYPERGDD GAIYNSVQLI DAHGRSLSNY RKTHLFGELD
RSMFSPGADH FPVVELEGWK VGLLICYDIE FPENARRLAL DGAELILVPT ANMTPYDFTC
QVTVRARAQE NQCYLVYANY CGAEDEIQYC GQSSIIGPDG SLLAMAGRDE CQLLAELEHE
RVVQGRTAFP YLTDLRQELH LRKG
|
|---|
| |