Gene Pput_0402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0402 
Symbol 
ID5193438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp466709 
End bp466984 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content61% 
IMG OID640584848 
Productpyrroloquinoline quinone biosynthesis protein PqqD 
Protein accessionYP_001265759 
Protein GI148545657 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTCG ACCGTAACCA AGTGCCGAAC TGGCGCCCCG GCTACCGCTT CCAGTACGAG 
CCGGCGCAAA AGGGCCATGT GTTGCTGTAC CCCGAAGGCA TGATCAAGCT CAACGACAGC
GCGAGCCTGA TCGGTGGCCT GATCGACGGC CAGCGTGACG TGGCAGCCAT CATCAGCGAA
CTCGAACAGC AATTCCCCGA TGTCCCGGAA GTGGCCGATG ACATCGAGCA GTTCATGGAG
GTGGCCCGTG CCGAACACTG GATCGTCCTC GCCTGA
 
Protein sequence
MSFDRNQVPN WRPGYRFQYE PAQKGHVLLY PEGMIKLNDS ASLIGGLIDG QRDVAAIISE 
LEQQFPDVPE VADDIEQFME VARAEHWIVL A