Gene Pput_0401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0401 
Symbol 
ID5193427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp465577 
End bp466707 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content62% 
IMG OID640584847 
Productpyrroloquinoline quinone biosynthesis protein PqqE 
Protein accessionYP_001265758 
Protein GI148545656 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID[TIGR02109] coenzyme PQQ biosynthesis protein E 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCACCTA CGCCCGAGGT CGGCCTGCCG CTGTGGCTGC TGGCCGAGCT GACCTACCGC 
TGCCCGCTGC AGTGCCCGTA TTGCTCCAAC CCGCTGGACT TCGCCGCCCA GGGCCAGGAG
CTGAGCACCG AACAGTGGTT CAAGGTCATG GCTGAAGCGC GGGAAATGGG TGCCGCACAA
ATCGGCTTTT CCGGCGGTGA ACCGCTGGTA CGCCAGGACC TTGCCCAGCT GATCGCAGAG
GCCCGCCGCC TGGGTTACTA CACCAACCTG ATCACCTCGG GCATTGGGCT GAACGAGGCG
CGCATCGCCG ACTTCAAAAA GGCTGGCCTG GACCATATCC AGATCAGCTT CCAGGCCAGC
GACGAGCAGG TGAACAACCT GCTGGCCGGC TCGAAAAAGG CTTTTGCACA GAAGCTGGAA
ATGGCCCGCG CGGTAAAAGC CCATGGCTAC CCGATGGTGC TCAACTTCGT CACCCATCGG
CACAACATCG ACAAGATCGA CCGCATCATC GAGTTGTGCA TTGCCCTTGA GGCCGACTTT
GTCGAACTCG CCACGTGCCA GTTCTATGGC TGGGCGCACC TCAACCGCCT TGGGCTGCTG
CCAACCCGCG CGCAGCTCGA GCGGGCAGAA CGTATCACCA ACGAATACCG GGACAAGCTC
AAGGCCGAGG GCAACCCGTG CAAGCTGATT TTCGTTACCC CTGACTACTA CGAAGAGCGC
CCCAAGGCCT GCATGAACGG TTGGGGCAAC CTGTTCCTCA CCATCACCCC GGACGGTACC
GCCTTGCCCT GCCACGGCGC CCGCCAGCTG CCCGTGCAGT TTCCGAATGT ACGCGACCAC
GACTTGCACC ATATCTGGTA TGAGTCGTTC GGTTTCAACC GCTTCCGTGG CTATGAGTGG
ATGCGCGAAC CTTGCCGCTC CTGCGACGAG AAAGAAAAGG ACTTCGGCGG CTGTCGCTGC
CAGGCCTTCA TGCTGACCGG CGATGCCAGC AACGCAGACC CGGTGTGCGC CAAATCGACC
GAGCACGGCA TCATCCTCAA GGCCCGCGAG GAGGCAGAAA CCGCCCAGCT CGCGATCGAA
CAGATGACCT TCCGCAATGA TCGAAACTCC CGTGTCATCG CCCGCGGCTG A
 
Protein sequence
MPPTPEVGLP LWLLAELTYR CPLQCPYCSN PLDFAAQGQE LSTEQWFKVM AEAREMGAAQ 
IGFSGGEPLV RQDLAQLIAE ARRLGYYTNL ITSGIGLNEA RIADFKKAGL DHIQISFQAS
DEQVNNLLAG SKKAFAQKLE MARAVKAHGY PMVLNFVTHR HNIDKIDRII ELCIALEADF
VELATCQFYG WAHLNRLGLL PTRAQLERAE RITNEYRDKL KAEGNPCKLI FVTPDYYEER
PKACMNGWGN LFLTITPDGT ALPCHGARQL PVQFPNVRDH DLHHIWYESF GFNRFRGYEW
MREPCRSCDE KEKDFGGCRC QAFMLTGDAS NADPVCAKST EHGIILKARE EAETAQLAIE
QMTFRNDRNS RVIARG