Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0401 |
Symbol | |
ID | 5193427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 465577 |
End bp | 466707 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640584847 |
Product | pyrroloquinoline quinone biosynthesis protein PqqE |
Protein accession | YP_001265758 |
Protein GI | 148545656 |
COG category | [R] General function prediction only |
COG ID | [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | [TIGR02109] coenzyme PQQ biosynthesis protein E |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCACCTA CGCCCGAGGT CGGCCTGCCG CTGTGGCTGC TGGCCGAGCT GACCTACCGC TGCCCGCTGC AGTGCCCGTA TTGCTCCAAC CCGCTGGACT TCGCCGCCCA GGGCCAGGAG CTGAGCACCG AACAGTGGTT CAAGGTCATG GCTGAAGCGC GGGAAATGGG TGCCGCACAA ATCGGCTTTT CCGGCGGTGA ACCGCTGGTA CGCCAGGACC TTGCCCAGCT GATCGCAGAG GCCCGCCGCC TGGGTTACTA CACCAACCTG ATCACCTCGG GCATTGGGCT GAACGAGGCG CGCATCGCCG ACTTCAAAAA GGCTGGCCTG GACCATATCC AGATCAGCTT CCAGGCCAGC GACGAGCAGG TGAACAACCT GCTGGCCGGC TCGAAAAAGG CTTTTGCACA GAAGCTGGAA ATGGCCCGCG CGGTAAAAGC CCATGGCTAC CCGATGGTGC TCAACTTCGT CACCCATCGG CACAACATCG ACAAGATCGA CCGCATCATC GAGTTGTGCA TTGCCCTTGA GGCCGACTTT GTCGAACTCG CCACGTGCCA GTTCTATGGC TGGGCGCACC TCAACCGCCT TGGGCTGCTG CCAACCCGCG CGCAGCTCGA GCGGGCAGAA CGTATCACCA ACGAATACCG GGACAAGCTC AAGGCCGAGG GCAACCCGTG CAAGCTGATT TTCGTTACCC CTGACTACTA CGAAGAGCGC CCCAAGGCCT GCATGAACGG TTGGGGCAAC CTGTTCCTCA CCATCACCCC GGACGGTACC GCCTTGCCCT GCCACGGCGC CCGCCAGCTG CCCGTGCAGT TTCCGAATGT ACGCGACCAC GACTTGCACC ATATCTGGTA TGAGTCGTTC GGTTTCAACC GCTTCCGTGG CTATGAGTGG ATGCGCGAAC CTTGCCGCTC CTGCGACGAG AAAGAAAAGG ACTTCGGCGG CTGTCGCTGC CAGGCCTTCA TGCTGACCGG CGATGCCAGC AACGCAGACC CGGTGTGCGC CAAATCGACC GAGCACGGCA TCATCCTCAA GGCCCGCGAG GAGGCAGAAA CCGCCCAGCT CGCGATCGAA CAGATGACCT TCCGCAATGA TCGAAACTCC CGTGTCATCG CCCGCGGCTG A
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Protein sequence | MPPTPEVGLP LWLLAELTYR CPLQCPYCSN PLDFAAQGQE LSTEQWFKVM AEAREMGAAQ IGFSGGEPLV RQDLAQLIAE ARRLGYYTNL ITSGIGLNEA RIADFKKAGL DHIQISFQAS DEQVNNLLAG SKKAFAQKLE MARAVKAHGY PMVLNFVTHR HNIDKIDRII ELCIALEADF VELATCQFYG WAHLNRLGLL PTRAQLERAE RITNEYRDKL KAEGNPCKLI FVTPDYYEER PKACMNGWGN LFLTITPDGT ALPCHGARQL PVQFPNVRDH DLHHIWYESF GFNRFRGYEW MREPCRSCDE KEKDFGGCRC QAFMLTGDAS NADPVCAKST EHGIILKARE EAETAQLAIE QMTFRNDRNS RVIARG
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