Gene Pput_0392 details

Gene Information

• Locus tag: Pput_0392
• Symbol: bioD
• ID: 5194192
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida F1
• Kingdom: Bacteria
• Replicon accession: NC_009512
• Strand: +
• Start bp: 453875
• End bp: 454555
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640584838
• Product: dithiobiotin synthetase
• Protein accession: YP_001265749
• Protein GI: 148545647
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0132] Dethiobiotin synthetase
• TIGRFAM ID: [TIGR00347] dethiobiotin synthase

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 23
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCCAGG CCTTTTTCAT TGCGGGTACC GATACCGATG TCGGCAAGAC CACCATCGCC 
GCCGGCCTGT TGCATGCGGC GCGTTTGCAG GGCATGAGCA CACTGGGTGC CAAGCCGGTG 
GCCTCGGGCT GCACCATGAC GCCGAAAGGC CTGCGCAATA GCGATGCCCT GGCGCTGATC 
GACGAAAGCA CGGTCAAGCT GCCCTATGAG CAGGTCAATC CGTTTGCCTT CGAGCCTGCT 
ATTGCCCCGC ATGTGGCGGC GCGCGAGGCA GGGGTGACGC TGGCTGTGCC AGAACTGCTC 
GCGGCGATGC GCAATGTGCT GCAACAAAAT GCCGACTTCA CCCTGATAGA GGGGGCCGGT 
GGCTGGCGCG TACCGCTGTC GGGCCTGGAG AACCTGTCCG ACCTTGCCGT TGCCCTGCGG 
TTGCCGGTGA TTCTGGTGGT AGGCGTGCGG TTGGGTTGCA TCAGCCATGC CTTGCTCAGC 
GCCGAAGCGA TCGAGCGTGA TGGGCTGCAG TTGGCGGGTT GGGTGGCAAA CATCATCGAG 
CCGCGCACTT CACGCCTGGA AGAGAACCTG GCCAGCCTTG CAGAGCGCTT GCCGGCGCCT 
TGCCTGGGGC GGGTGCCCAA GCTCAAGCAG GCCAGTGCCG ACATGGTGGC TGAGCATCTG 
CAGCTGGATC TGCTGGATTA G 

 

Protein sequence

MSQAFFIAGT DTDVGKTTIA AGLLHAARLQ GMSTLGAKPV ASGCTMTPKG LRNSDALALI 
DESTVKLPYE QVNPFAFEPA IAPHVAAREA GVTLAVPELL AAMRNVLQQN ADFTLIEGAG 
GWRVPLSGLE NLSDLAVALR LPVILVVGVR LGCISHALLS AEAIERDGLQ LAGWVANIIE 
PRTSRLEENL ASLAERLPAP CLGRVPKLKQ ASADMVAEHL QLDLLD