| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0389 |
|---|
| Symbol | |
|---|
| ID | 5195061 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 451157 |
|---|
| End bp | 452329 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640584835 |
|---|
| Product | 8-amino-7-oxononanoate synthase |
|---|
| Protein accession | YP_001265746 |
|---|
| Protein GI | 148545644 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.598299 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTCG ACCTGGCAGC GCGCCTGGCC GAACGGCGCG CCGCAGACCT GTATCGGCAG
CGGCCATTGC TGGAAAGCCC GCAAGGGCCG GAAGTCGTGG TCGACGGCCA GCGGTTGCTG
GCCTTCTGCA GCAATGACTA CCTGGGCCTG GCGAACCACC CCGAGGTGAT CACCGCCTGG
CAGGCCGGCG CCGAGCGCTG GGGTGTGGGG GGTGGTGCCT CGCACCTGGT GGTTGGCCAC
AGCACTCCGC ACCATCAGGT TGAAGAGGCA CTGGCTGAAC TGACCGGCCG CCCGCGCGCA
CTGTTGTTCT CCACCGGTTA TATGGCCAAT CTGGGCGCCA TCACGGCGCT GGTAGGGCAG
GGCGACACGG TACTGCAAGA CCGCCTCAAC CATGCCTCGC TGCTGGATGG CGGGCTGCTC
AGTGGTGCCC GCTTCAACCG TTACCTGCAT AACGACCCGG CCAGCCTGGC CAGCCGCCTG
GACAAGGCAG TCGGCAATAC CCTGGTGGTG ACCGATGGCG TATTCAGCAT GGACGGTGAC
CTGGCCGACC TACCGGCGCT GGCTGATGTC GCCCGTGCCC GCGGAGCCTG GCTGATGGTT
GACGATGCCC ATGGCCTGGG TACCTTGGGC ACACAGGGCG GCGGCATCGT CGAGCACTTT
GGCCTGGGCG TGGATGACGT ACCGGTGCTG ATCGGCACGC TGGGCAAGGC TTGCGGCACT
GCGGGCGCCT TTGTTGCTGG CAGCGAAGCG CTGATCGAGG CGTTGGTACA GTTCGCCCGC
CCCTATATCT ACACCACCAG CCAGCCACCG GCGCTGGCCT GCGCCACACT CAAGAGCCTG
GAGCTGCTGC GCCGCGAAAC CTGGCGTCGT GAGCACCTGG CAGCCTTGAT TCGCCAGTTC
CGAGAAGGCG CGCAGCAGAT GGGGCTGCAG TTGATGGACA GCCCGACGCC AATCCAGCCC
ATCGTCATCG GCGACAGTGC GCAGGCGTTG CGCCTGTCAC GCCTGCTGCG TGAGCGCGGC
TTGCTGGTGA CGGCCATCCG CCCACCCACC GTGCCGGCTG GCAGCGCACG CCTGCGGGTA
ACCCTGAGCG CCGCACACAG CGAGGCGCAG GTGCAGCTAT TGTTGAATGC ATTGGCCGAG
TGTTATCCAC AGTTGGAGAA CGCCGATGCG TAA
|
|---|
| Protein sequence | MAFDLAARLA ERRAADLYRQ RPLLESPQGP EVVVDGQRLL AFCSNDYLGL ANHPEVITAW
QAGAERWGVG GGASHLVVGH STPHHQVEEA LAELTGRPRA LLFSTGYMAN LGAITALVGQ
GDTVLQDRLN HASLLDGGLL SGARFNRYLH NDPASLASRL DKAVGNTLVV TDGVFSMDGD
LADLPALADV ARARGAWLMV DDAHGLGTLG TQGGGIVEHF GLGVDDVPVL IGTLGKACGT
AGAFVAGSEA LIEALVQFAR PYIYTTSQPP ALACATLKSL ELLRRETWRR EHLAALIRQF
REGAQQMGLQ LMDSPTPIQP IVIGDSAQAL RLSRLLRERG LLVTAIRPPT VPAGSARLRV
TLSAAHSEAQ VQLLLNALAE CYPQLENADA
|
|---|
| |