Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0381 |
Symbol | |
ID | 5190598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 442314 |
End bp | 442859 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640584827 |
Product | response regulator receiver protein |
Protein accession | YP_001265738 |
Protein GI | 148545636 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.020205 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.875608 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCCC TTGTCAAAGA CCCGACGAAA GGCGAAACGG GTTACGCAAG TAATGCGGTC CTAATGCTGA AGCGGAATTA TTTTGACGAG ACAAGCATGC CCGAGCACAC CGACATCCTG AGCGACGCCG AGCGCGAGGC CTTGGCCGTG ATAAACCAAA GTGCGCCTGT GGAAGCCAGA CCGTTGGTGC TGGTGGTGGA TGACAACGCG GTGAACCGCG AGGCGCTGAT CCTGTACCTG AAAAGCCGGG GCATTGATGC GGTGGGGGCG GATGGGGCCG AGGAAGCCAG GTTGTACCTG CACTACCAGA AGCGTATCGG GTTGATGATT ACCGATTTGC GCATGCAGCC TGAAAGTGGA CTGGACTTGA TCAGGACAAT TCGCGCGTCG GAGCGGGCGG CGTTATCGAT CATTGTGGTG TCGGGTGACA CCGATGTGGA AGAAGCAGTG GATGTGATGC ACCTGGGGGT GGTGGACTTC CTGCTCAAAC CGGTGGATTT GGGCAAGCTG TTGGAGCTGG TGAGGAAAGA ACTGAAAATG GGTTGA
|
Protein sequence | MSALVKDPTK GETGYASNAV LMLKRNYFDE TSMPEHTDIL SDAEREALAV INQSAPVEAR PLVLVVDDNA VNREALILYL KSRGIDAVGA DGAEEARLYL HYQKRIGLMI TDLRMQPESG LDLIRTIRAS ERAALSIIVV SGDTDVEEAV DVMHLGVVDF LLKPVDLGKL LELVRKELKM G
|
| |