| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0380 |
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| Symbol | |
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| ID | 5192769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 440260 |
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| End bp | 442197 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640584826 |
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| Product | CBS domain-containing protein |
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| Protein accession | YP_001265737 |
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| Protein GI | 148545635 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.488205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAA AGGACGCCTA CAGCCAGGCG GGCAAGACAG CGGTACTGCA AAACATCCAA
GGCACATTGC AGTTCCTGCA GCGCTTTCCG CCGTTCAATC AGATGGAGCA CAGCCACCTG
GCCTTCTTGG TCGAGCAGTG CCAGCTGCGC TTCTACGCCT GCGGTGAAAG CATCGTCAAA
CCTGCCGACG GGCCGGTCGA GCACTTCTAC ATCGTCAAGC AAGGCCGCGT GGTTGGCGAG
CGCCAGCACC TGGCCAAACC GGGTGTCGAA ACCACGTTCG AGATCACCAG CGGGGAGTGC
TTCCCGCTGG CAGCCCTGCT GGGTGAGCGG GCAACCCGCA CCGAGCACCT GGCCGGGGAA
GACACCTTCT GCCTGCAACT GAACAAGGCC GCATTCATCC GCGTGTTCTC GATGTCTGAA
GTGTTTCGGG ATTTTGCCCT GCGCGGTGTC AGCAGCCTGC TTGATCAGGT CAATCAGCAA
GTACGCCAGC GCGCTGTGGA AACCCTCGGC ACCCAATACT CGCTGAACAC CCCCCTGGGT
GAACTGGCCA TGCGTCACCC GGTGGTGTGC AGCGCCCATA CGCCCCTGCG CGAAGCCGTG
CGGCTGATGC ACGAGCAACA GGTGGGCAGC ATCGTGGTGG TCGACCCGCA GCGCTACCCC
ATCGGTATCT TCACCTTGCG CGACCTGCGC CAGGTGGTGG CGACAGTAGA TGCCGACCTG
GGCGCCGCCA TCGACCGGCA CATGACCGCC AAACCGTTCT ACCTCCCACC CCAGGCCAGC
GCCTTCGATG CCGCCATGGC CATGACCGAG CGGCATATTG CCCATGTCTG CCTGGTGGAA
AACGGACGCC TGTGCGGCGT GGTTTCCGAG CGCGACCTGT TCTCCCTGCA ACGGGTCGAT
CTGGTTCACC TGGCGCGCAC CATACGCCAT GCGCCACGCC TGGATACGCT GGTTTCGCTG
CGCGGCGAAA TCAGCCAGCT TGTAGAACGC ATGCTGGCCC ATGGCGCATC GTCGACGCAG
ATCACCCAGA TCATTACCTT GCTCAACGAC CATACCGTGT GCCGGGTCAT CGAACTGGCC
CTGGCCGAAC GTGGCGACCC GGGCGTGCCG TTCAGCTGGC TGTGCTTTGG CAGCGAAGGG
CGACGTGAGC AGACCCTGCA CACCGACCAG GACAACGGCA TCCTCTTCGA AGCAGTCGAC
AGCGCCGAGG CCGACGCCAT CCGCGCTCGC CTGCTGCCGC TGGCGCAATA CATCAACCAA
TGCCTGGCCC AGTGCGGTTT CACCCTGTGC ACGGGTAACG TCATGGCCGG CAACCCCGAA
CTGTGCCTGT CGCGCAGCGA GTGGGCGCGG CGCTTTGCCG GGTTTGTCCG CGAAGCCAGC
CCGGAGAGCC TGCTGGGCTC GAGCATCTAC TTCGACCTGC GTGTGGTGTG GGGCGACGAG
CAAGGCTGCG AGCAACTGCG CCAGGGCCTG CTGGCACAGG TAGCCGACAA CCGCATCTTC
CAGCGCATGA TGGCTGACAA CGCCCTGCGC CAACGCCCGC CGGTGGGCCG GTTGCGCGAG
TTCGTGCTGA CACGCCAGGG CAACGACAAG GCGGCGACCC TCGACCTCAA GGTCCAGGGC
CTGACGCCCT TCGTGGATGG TGCCCGTTTG CTGGCCCTGG CCAATGGCAT AGCAGCCTGC
AATACCCTGG AGCGCCTACG CCAACTGGTG GCCAAGGGCG TGATCGAGCC GTTGGACGGC
GCCGCCTATG AAGAGGCCTA CCACTTCATC CAGCAAACCC GCATGCAGCA GCACCAACGC
CAGATTCGCG ACAACCTGCC TTACTCCAAC CGGCTCGACC CGGACAGCCT CAACCACCTG
GACCGGCGCA TCCTGCGCGA GTCGCTGCGC CAGGCTCAGC GCCTGCAAAG CAGCCTGGCC
TTGCGGTATC AGCTATGA
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| Protein sequence | MSKKDAYSQA GKTAVLQNIQ GTLQFLQRFP PFNQMEHSHL AFLVEQCQLR FYACGESIVK
PADGPVEHFY IVKQGRVVGE RQHLAKPGVE TTFEITSGEC FPLAALLGER ATRTEHLAGE
DTFCLQLNKA AFIRVFSMSE VFRDFALRGV SSLLDQVNQQ VRQRAVETLG TQYSLNTPLG
ELAMRHPVVC SAHTPLREAV RLMHEQQVGS IVVVDPQRYP IGIFTLRDLR QVVATVDADL
GAAIDRHMTA KPFYLPPQAS AFDAAMAMTE RHIAHVCLVE NGRLCGVVSE RDLFSLQRVD
LVHLARTIRH APRLDTLVSL RGEISQLVER MLAHGASSTQ ITQIITLLND HTVCRVIELA
LAERGDPGVP FSWLCFGSEG RREQTLHTDQ DNGILFEAVD SAEADAIRAR LLPLAQYINQ
CLAQCGFTLC TGNVMAGNPE LCLSRSEWAR RFAGFVREAS PESLLGSSIY FDLRVVWGDE
QGCEQLRQGL LAQVADNRIF QRMMADNALR QRPPVGRLRE FVLTRQGNDK AATLDLKVQG
LTPFVDGARL LALANGIAAC NTLERLRQLV AKGVIEPLDG AAYEEAYHFI QQTRMQQHQR
QIRDNLPYSN RLDPDSLNHL DRRILRESLR QAQRLQSSLA LRYQL
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