| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0378 |
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| Symbol | |
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| ID | 5191686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 438831 |
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| End bp | 439349 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640584824 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001265735 |
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| Protein GI | 148545633 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.425912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCTTCTG CACAAAGCCC ACACGCCGAT CTGGTCGGTG CGCTGTACCG CGACCACCGC
GGCTGGCTGC TCGCCTGGCT GCAACGCAGC ATGGCCTGCC GCCAACGTGC CGAAGACCTG
AGCCAGGACA CCTTCGTGCG CCTGCTTGGT CGTGAGCAAC TGGAGACACC CCGCGAACCC
CGCGCGTTTC TGGCCGCCGT GGCCAAGGGG CTGATGTTCG ACCACTTCCG TCGCACCGCG
CTGGAACAAG CCTACCTGGC CGAGCTGGCA TTGATCCCTG AAGCCGAACA GCCGTCGCCA
GAAATGCAGC ACCTGATCCT TGAAGACCTC AAAGCCATCG ACCGCCTGCT CGGCAAGCTG
TCGAGCAAGG CTCGCGCGGC GTTTCTGCAC AGCCGCCTGG ACGGCATGGG CCATGCCGAG
ATTGCCGAGC GCCTTGGCGT TTCGGTGTCG CGGGTGCGCC AGTACATCGC CCAAGGGATG
CGCCAGTGCT ATGTAGCCCT GTATGGGGAG CCGACGTGA
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| Protein sequence | MSSAQSPHAD LVGALYRDHR GWLLAWLQRS MACRQRAEDL SQDTFVRLLG REQLETPREP
RAFLAAVAKG LMFDHFRRTA LEQAYLAELA LIPEAEQPSP EMQHLILEDL KAIDRLLGKL
SSKARAAFLH SRLDGMGHAE IAERLGVSVS RVRQYIAQGM RQCYVALYGE PT
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