Gene Pput_0372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0372 
Symbol 
ID5192595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp429527 
End bp430969 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content64% 
IMG OID640584818 
Producthypothetical protein 
Protein accessionYP_001265729 
Protein GI148545627 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.912848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTGT CTGAACTGAA GGATGCCGGG CGCAGCCCGA CGCTGCCCCT GAGTATCACG 
TTGGTTGATG CCGCCGGCAG TGCCGACTTG CAACTGCTCA CCCTGCTGCG TGTGCTGCCG
GGCCAGCGTT ATGTGGGCGC TGGTGTCTGG CGTGGCACAC CGGTGCTGGC GAAGCTGCTG
GTCGGTGGTA ACGCCGCGCG GCATTTCCAG CGCGAACTGC AGGGTGTGAA GTTGCTGGCC
GAACAAGGCC TGACCACACC GACGCTACTG GCCGACGGCC TCAAGGAAGG CGAGGGCGGC
TGGCTGCTGT TCGAGTTCCT TGACGGTGCC CAAAGCCTGG CCGATGCCTG GGCCGCAGTG
GCAAACCTGC CAGTGCTGGC GGACGAGCAG CACCTGGTAC TGGGCGAAGC GCTCACGGCT
GTGGCGCACA TGCACGCCCA AGGCCTTTGG CAGGAAGACC TGCACCTGGA CAACCTGCTG
CGCCATGCCG GCAAGCTGTA CCTGATCGAC GGTGCGGGCA TCAGGGCGGA AACACCCGGT
CAGCAGTTGT CGCGACCACG GGTGCTGGAA AACCTCGGGG TGTTTTTCGC CCAGTTGCCC
AAGCGCCTGG AGCCGTTCAT CGAAGAGCTG CTGGTGCATT ACCTGCTGGC CAATGCCGAG
CATGCGTTGC CGCTGGAAGC CCTGCAGAAA CAGGTGGACA AGGTGCGTAC CTGGCGCCAG
AAGGACTATC TGGACAAGGC TGGCCGCGAG TGCAGCCTGT TCAGCGTCCA GCGCACCCTC
TCGGGCTTGC AGGCGATCCG CCGCAGTGAG GTCGAGGCCA TGCAGCCTGT ACTGGAGCAG
GCCGATGCGC TGATCGACAA AGGCCATTTG TACAAGACCG GTGGCGCTGC CAGCGTGGCG
CGCATCGAGG TCAATGGTCG CCCGTTGGTG ATCAAGCGCT ACAACATCAA GAACACCGCA
CATTGGTTCA AGCGCTTCTG GCGCCCAAGC CGGGCCTGGC ATTCCTGGAT TGAAGGCCAC
CGCCTGGAAT TCCTCGACAT CGCCACGCCA CGCCCCCTCG CGGTGCTGGA ACAGCGGGTG
CTGGGCCTGC GCAGCCGTGC TTACCTGGTC ACCGAGTATG TCGACGGCCC GGACCTGACG
GCGTGCTTCG CGCCCTACGT CGAAAGCGGC GATGCGCCCG AGGAGCAGGT GGATGCCTTG
GTGCACGTGA TGCAGCAGCT GATTCGCGAA CGCATCAGTC ACGGCGACTT CAAAGGCCAT
AACCTGTTCT GGCACAACGG CCAGTGGTCG CTGATCGACC TCGATGCCAT GTGCCAGCAC
GCCACCCAGC TCAGCTTCGC ACCGGCCTAT GCCCGTGACC GGGCACGGCT GCTGCGCAAC
TGGCCCAATG GCAGTGCCTT GCATCAGCGG CTGGACCGGC TGTTGCCAAA ACTGGTCGAC
TGA
 
Protein sequence
MRLSELKDAG RSPTLPLSIT LVDAAGSADL QLLTLLRVLP GQRYVGAGVW RGTPVLAKLL 
VGGNAARHFQ RELQGVKLLA EQGLTTPTLL ADGLKEGEGG WLLFEFLDGA QSLADAWAAV
ANLPVLADEQ HLVLGEALTA VAHMHAQGLW QEDLHLDNLL RHAGKLYLID GAGIRAETPG
QQLSRPRVLE NLGVFFAQLP KRLEPFIEEL LVHYLLANAE HALPLEALQK QVDKVRTWRQ
KDYLDKAGRE CSLFSVQRTL SGLQAIRRSE VEAMQPVLEQ ADALIDKGHL YKTGGAASVA
RIEVNGRPLV IKRYNIKNTA HWFKRFWRPS RAWHSWIEGH RLEFLDIATP RPLAVLEQRV
LGLRSRAYLV TEYVDGPDLT ACFAPYVESG DAPEEQVDAL VHVMQQLIRE RISHGDFKGH
NLFWHNGQWS LIDLDAMCQH ATQLSFAPAY ARDRARLLRN WPNGSALHQR LDRLLPKLVD