Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0353 |
Symbol | |
ID | 5193975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 403746 |
End bp | 404732 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640584799 |
Product | hypothetical protein |
Protein accession | YP_001265710 |
Protein GI | 148545608 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.395139 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGGACGA AAGCTATTAT GGAACAACTT TTCTACCAAG CCCGTAATCT TGTCACATTG AAAGAGAACG GACAGTATCG TTCAATCTTC AGGTCCCCTA TGCACCTACT CGCCGAGTTT CGCGGCGAAA ATATATACCC CATAGAACTG TTAGCGACAG ACACGAAGAA AACGATAATG CACGCCCATG ATGGCGTAAA AAAAGAACAT CACACTTATA CTGTTTTCGG ACACTCCGGA ACTTTACTAC CCAAACGAAC ACTGCAAGGT TTCAATGGTG AACCAATAGA CCACTTATTA AGCGCCTACC ATCTAGGGCA GGGCTATAGA ACATACTCTC CAGGCCTGAT GCGCTTTCAA TCACCGGATA GTCATAGCCC CTTTGGGAAG GGTGGAGTTA ACTATTACGC ATACTGCGGC GGAGATCCAG TCAATTATAC AGATCCGACC GGCCATGTAT TTGTCCAATT GACAAAAGGT CAGACCATGA AGGTACGCAG GCATTCGGCC GTGGCGCTTC CTCATAAATT CAATCCCTCC AGCCTGAAAC GTACCACTTC ACATGCCAGC GCATTGAAAG CAGGTACGCC CAAATACGCG CGCCCTCCAG AAGATCATTT CAAGAGAATC GGAGAGCCTG ACATTTTTGA GTCAATCATC AACAACCTTA CACTCGATGA TGCTCTTGCC TTTTCAAATA CATCTCAACA CAACAGGAGT CACGCCGTAC CGGTTATTTA TCGCTATCTA TCACTCGCTA CAGTTTCTGA TGCTTCCGTG GGAGCTGCTC GGGCTGGCGT ACTTCCCGGC TTGCCTAGGA TCTTTGGACA AAATTTTGAA TTGCATCCAT ATCTACAAGA CATAAACATG TTAAGAGACG TAGATATACT AAGGGCTGGC GGCGTTCGAA ATGTTGTCCG ACTTAGAACA TTCGACAGGC TGTATACTGA GGAAACATTG CAAGCAGCGA CAGCATCGGT AGACTGA
|
Protein sequence | MWTKAIMEQL FYQARNLVTL KENGQYRSIF RSPMHLLAEF RGENIYPIEL LATDTKKTIM HAHDGVKKEH HTYTVFGHSG TLLPKRTLQG FNGEPIDHLL SAYHLGQGYR TYSPGLMRFQ SPDSHSPFGK GGVNYYAYCG GDPVNYTDPT GHVFVQLTKG QTMKVRRHSA VALPHKFNPS SLKRTTSHAS ALKAGTPKYA RPPEDHFKRI GEPDIFESII NNLTLDDALA FSNTSQHNRS HAVPVIYRYL SLATVSDASV GAARAGVLPG LPRIFGQNFE LHPYLQDINM LRDVDILRAG GVRNVVRLRT FDRLYTEETL QAATASVD
|
| |