Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0351 |
Symbol | |
ID | 5194961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 401894 |
End bp | 402682 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640584797 |
Product | hypothetical protein |
Protein accession | YP_001265708 |
Protein GI | 148545606 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.50807 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTAACC ACCAAACACA TACCTATACT GCCTATGGTT ACGCAACGAC ATTGCCGTCG GAAAAAGCAC GTCAAGGATT TAATGGTGAG TTCCCTGACG CGCTGACGGG GCTTTACTTT CTAGGTTCCG GATATAGAGC ATATGAAACC AAACTGATGC GCTTCATATC ACCTGACAGC TTAAGCCCAT TTGCTGAAGG GGGCATTAAT TCATACTGCT ACTGCGGCAA CGACCCAGTC AACAACAGTG ACCCCACGGG CCATGTCGGT GTACGCGCAG CTATTGTTAA GCGGCGACTT CCATTGCCCC GGACACGCTC ACAGACACTG CTTCAACTCG ATAGTCCGGC CCAAGTCAAC ACACCTTATC ATCGGGATGC TCCGCCTTAC TTTACCTCCC ATCCCGCAGT ATTTTCGACA TCAGGTACTC CGCCCACTTA TAACCTTGGA GCGCTTCCAA GCTATTCCGA GCAGTTGCCA ACCGGGCACC AGCGCATTGT CACACCTACC CTGTTGCCCA CTGATAAAGG CCCGAAATTT CTCCCCCCCC CCAGACCACC TAGATATCCG ATACCTAAAC CCCAGCCTGA GATACAAGCT GCTCTTCCGC CAGATCAAGC TCGAGCCTAC CGAGTTAGGC TACAGGCTAT GCACGATAGG TATCGCCGGT TGAAACAGGT ACTCAGAAGG TTGGAACGTG GAGACATGCA TGTCCCTGAA GAACTTCGCC GGAATATCGA ACAATTGCGC CAAGAGGGAA CCCGCATCCG AGAGTTGCTA GCAGATTAG
|
Protein sequence | MSNHQTHTYT AYGYATTLPS EKARQGFNGE FPDALTGLYF LGSGYRAYET KLMRFISPDS LSPFAEGGIN SYCYCGNDPV NNSDPTGHVG VRAAIVKRRL PLPRTRSQTL LQLDSPAQVN TPYHRDAPPY FTSHPAVFST SGTPPTYNLG ALPSYSEQLP TGHQRIVTPT LLPTDKGPKF LPPPRPPRYP IPKPQPEIQA ALPPDQARAY RVRLQAMHDR YRRLKQVLRR LERGDMHVPE ELRRNIEQLR QEGTRIRELL AD
|
| |