| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0350 |
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| Symbol | |
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| ID | 5194960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 400536 |
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| End bp | 401735 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640584796 |
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| Product | formaldehyde dehydrogenase, glutathione-independent |
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| Protein accession | YP_001265707 |
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| Protein GI | 148545605 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR02819] formaldehyde dehydrogenase, glutathione-independent |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.383522 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGGCA ATCGTGGAGT GGTATATCTC GGCGCCGGCA AGGTCGAAGT GCAACACATC
GACTACCCGA AAATGCAGGA CCCGCGCGGC AAGAAAATCG AACACGGCGT CATCCTGAAG
GTGGTCTCCA CCAACATCTG CGGTTCTGAC CAGCACATGG TCCGTGGCCG CACCACTGCC
CAGGTCGGCC TGGTCCTGGG CCACGAAATC ACCGGTGAAA TCGTCGAGAA GGGTCGCGAT
GTCGAGCGCA TGCAGATCGG CGACCTGGTA TCGGTCCCGT TCAACGTCGC CTGCGGCCGC
TGCCGCTCCT GCAAAGAGAT GCACACCGGT GTCTGCCTCA CCGTCAACCC GGCGCGCGCC
GGCGGTGCCT ACGGCTACGT CGACATGGGC GACTGGACCG GTGGCCAAGC CGAATACGTG
CTGGTGCCTT ACGCCGACTT CAACCTGCTG AAGCTGCCTG AGCGCGACAA GGCCATGGAA
AAGATCCGTG ACCTGACTTG CCTGTCCGAC ATCCTGCCCA CCGGCTATCA CGGTGCCGTA
ACGGCAGGCG TAGGCCCAGG CAGCACGGTC TACGTTGCCG GTGCTGGCCC GGTCGGCCTG
GCCGCCGCTG CCTCGGCGCG CCTGCTGGGC GCCGCCTGCG TAATCGTCGG TGACCTCAAC
CCGGCTCGCC TGGCCCATGC CAAGTCGCAG GGCTTCGAAG TGGTCGACCT GTCCAAGGAC
ACCCCGCTGC ACGAGCAGAT CGTCGACATC CTCGGCGAGC CGGAAGTGGA CTGCGCCGTC
GACGCCGTCG GCTTCGAGGC CCGTGGCCAT GGCCACGAAG GTGCCAAACA CGAGGCCCCG
GCCACCGTGC TGAACTCGCT GATGCAAGTG ACCCGCGTGG CCGGCAACAT CGGTATCCCG
GGCCTGTACG TGACCGAAGA CCCAGGCGCG GTGGATGCCG CTGCCAAGAT CGGCGCGCTG
AGCATCCGCT TCGGCCTGGG CTGGGCGAAA TCGCACAGCT TCCACACCGG CCAGACCCCG
ACCATGAAGT ACAACCGCCA GCTGATGCAG GCGATCATGT GGGACCGCAT CAACATTGCT
GAAGTGGTGG GTGTGCAGGT GATCAACCTG GATCAGGCGC CGGAAGGGTA TGGCGAGTTT
GATGCGGGTG TGCCTAAGAA GTTTGTGATT GACCCGCATA AGATGTGGGG TGCGGCGTAA
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| Protein sequence | MSGNRGVVYL GAGKVEVQHI DYPKMQDPRG KKIEHGVILK VVSTNICGSD QHMVRGRTTA
QVGLVLGHEI TGEIVEKGRD VERMQIGDLV SVPFNVACGR CRSCKEMHTG VCLTVNPARA
GGAYGYVDMG DWTGGQAEYV LVPYADFNLL KLPERDKAME KIRDLTCLSD ILPTGYHGAV
TAGVGPGSTV YVAGAGPVGL AAAASARLLG AACVIVGDLN PARLAHAKSQ GFEVVDLSKD
TPLHEQIVDI LGEPEVDCAV DAVGFEARGH GHEGAKHEAP ATVLNSLMQV TRVAGNIGIP
GLYVTEDPGA VDAAAKIGAL SIRFGLGWAK SHSFHTGQTP TMKYNRQLMQ AIMWDRINIA
EVVGVQVINL DQAPEGYGEF DAGVPKKFVI DPHKMWGAA
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