| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0348 |
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| Symbol | |
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| ID | 5191803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 398733 |
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| End bp | 399365 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640584794 |
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| Product | sarcosine oxidase gamma subunit family protein |
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| Protein accession | YP_001265705 |
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| Protein GI | 148545603 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4583] Sarcosine oxidase gamma subunit |
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| TIGRFAM ID | [TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.448835 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCTA TCAACGTCTT CCAGCAAAAC CCCGGCGCCG AGGCCAAAGC CCAGTCGCCA
CTGCACCATG CCGACCTGGC CAGCCTGGTA GGCAAAGGCC GCAAGAACGC AGGCGTGACC
CTGCGTGAAC GCAAGTTCCT CGGTCACCTC ACCCTGCGTG GTGATGGCCA CAACCCGGAA
TTCGCCGCCG GCGTGCACAA GGCCCTTGGC CTGGAGCTGC CCGTGGCGCT GACCGTGGTC
GCCAACAAGG ACATGTCGCT GCAATGGGTC GGCCCAGATG AGTGGCTGCT GATCGTACCC
GGCGGCCAGG AGCTGGCAGC GGAGCAAAAG CTGCGCGCGG CCCTTGAAGG CCAGCACATT
CAGGTCGTCA ATGTCAGTGG CGGGCAAAGC CTGCTGGAAC TGCGCGGCCC GAACGTGCGC
GACGTGCTGA TGAAGTCCAC CAGCTATGAT GTTCACCCGA ACAACTTCCC GGTGGGCAAG
GCCGTGGGCA CCGTGTTCGC CAAGTCGCAA CTGGTGATCC GCCGCACTGC AGAAGACACC
TGGGAGCTGG TAATTCGCCG CAGCTTCGCC GATTACTGGT GGCTGTGGCT ACAGGACGCT
TCTGCCGAAT ACGGCCTGAG CATCGAAGCC TAA
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| Protein sequence | MSAINVFQQN PGAEAKAQSP LHHADLASLV GKGRKNAGVT LRERKFLGHL TLRGDGHNPE
FAAGVHKALG LELPVALTVV ANKDMSLQWV GPDEWLLIVP GGQELAAEQK LRAALEGQHI
QVVNVSGGQS LLELRGPNVR DVLMKSTSYD VHPNNFPVGK AVGTVFAKSQ LVIRRTAEDT
WELVIRRSFA DYWWLWLQDA SAEYGLSIEA
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