Gene Pput_0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0338 
Symbol 
ID5191555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp385773 
End bp386495 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content53% 
IMG OID640584784 
Producthypothetical protein 
Protein accessionYP_001265695 
Protein GI148545593 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0399625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.840977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTACA AAAAAGGGGG GGGCATGGTG GACGAAGGAA TATTGCATCT CCATTTATCC 
AGCTCATTCT TGCCCAATGC TGGCCGTAGG GTCTGCGCAT ATAGCCCCTA TGGTGTAGTT
CATGACAATG GCGCTGCTAT GATCGCATTC AATGCTGAAC TGCGTGACAG CGCTACCAGT
AATTATCTGC TCGGAAAAGG CAGGCGTATG TACAGCCCAG CATTAATGCG ATTTCTCAGC
GCGGATCGGC TAAGCCCCTT CTCGCGGGGA GGAATCAATG CATACGCTTA CTGCCATGGG
AATCCTGTCA ATCGAGTGGA CCCCACTGGC CAATACAGCG TCACCAAGGT AATTGCGAAC
ACTGTATGGC TTGGAAAGCG TGCCAAAGCG TCTATGTCCA ATCTTAAGGG GCTCAAGCGG
CTAGACGATA GGAACAAATG GGTAAAGAAG GTCGGCGTAG TGATGGTTGC GGCGGGAGTG
CCGGGTGCTA ACTGGGTCAA CGTGGCAAGC TTTGCTGTAA AAATGGGAAG CGCGACAGTT
GATGTCGGCT TCTTCTTTGG CCGTAAGGCT GTTGACTATT TTGTCATGCA TAAAGTCAGG
CCCATGATAG CGGGGATTCT ACCGCCCAAT GGGCTCTCGC GTGTCAATAG TGCCCCTCCT
GTGTCGCAGG TCACGCAAGT TCGGGAGGGG CACTTATCAA GGCGGCATAG CAGTGCCTTT
TAG
 
Protein sequence
MLYKKGGGMV DEGILHLHLS SSFLPNAGRR VCAYSPYGVV HDNGAAMIAF NAELRDSATS 
NYLLGKGRRM YSPALMRFLS ADRLSPFSRG GINAYAYCHG NPVNRVDPTG QYSVTKVIAN
TVWLGKRAKA SMSNLKGLKR LDDRNKWVKK VGVVMVAAGV PGANWVNVAS FAVKMGSATV
DVGFFFGRKA VDYFVMHKVR PMIAGILPPN GLSRVNSAPP VSQVTQVREG HLSRRHSSAF