Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0338 |
Symbol | |
ID | 5191555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 385773 |
End bp | 386495 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640584784 |
Product | hypothetical protein |
Protein accession | YP_001265695 |
Protein GI | 148545593 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0399625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.840977 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTACA AAAAAGGGGG GGGCATGGTG GACGAAGGAA TATTGCATCT CCATTTATCC AGCTCATTCT TGCCCAATGC TGGCCGTAGG GTCTGCGCAT ATAGCCCCTA TGGTGTAGTT CATGACAATG GCGCTGCTAT GATCGCATTC AATGCTGAAC TGCGTGACAG CGCTACCAGT AATTATCTGC TCGGAAAAGG CAGGCGTATG TACAGCCCAG CATTAATGCG ATTTCTCAGC GCGGATCGGC TAAGCCCCTT CTCGCGGGGA GGAATCAATG CATACGCTTA CTGCCATGGG AATCCTGTCA ATCGAGTGGA CCCCACTGGC CAATACAGCG TCACCAAGGT AATTGCGAAC ACTGTATGGC TTGGAAAGCG TGCCAAAGCG TCTATGTCCA ATCTTAAGGG GCTCAAGCGG CTAGACGATA GGAACAAATG GGTAAAGAAG GTCGGCGTAG TGATGGTTGC GGCGGGAGTG CCGGGTGCTA ACTGGGTCAA CGTGGCAAGC TTTGCTGTAA AAATGGGAAG CGCGACAGTT GATGTCGGCT TCTTCTTTGG CCGTAAGGCT GTTGACTATT TTGTCATGCA TAAAGTCAGG CCCATGATAG CGGGGATTCT ACCGCCCAAT GGGCTCTCGC GTGTCAATAG TGCCCCTCCT GTGTCGCAGG TCACGCAAGT TCGGGAGGGG CACTTATCAA GGCGGCATAG CAGTGCCTTT TAG
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Protein sequence | MLYKKGGGMV DEGILHLHLS SSFLPNAGRR VCAYSPYGVV HDNGAAMIAF NAELRDSATS NYLLGKGRRM YSPALMRFLS ADRLSPFSRG GINAYAYCHG NPVNRVDPTG QYSVTKVIAN TVWLGKRAKA SMSNLKGLKR LDDRNKWVKK VGVVMVAAGV PGANWVNVAS FAVKMGSATV DVGFFFGRKA VDYFVMHKVR PMIAGILPPN GLSRVNSAPP VSQVTQVREG HLSRRHSSAF
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