Gene Pput_0332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0332 
Symbol 
ID5191365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp377517 
End bp379469 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content63% 
IMG OID640584778 
Producthypothetical protein 
Protein accessionYP_001265689 
Protein GI148545587 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0251968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.525566 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAACA CCCTTCTACC CATCCTGCTG TTCGCTGCCC TTGGCCTGGC AGTGCTCGGT 
GCCTTGCGCC GGGTGCGCAT GTGGCGCCGT GGCCGGCCGT CCAAGGTCAA CCTGATCGGC
GGCCTGCTGG CCATGCCGCG GCGCTACCTG GTGGACCTGC ACCACGTGGT TGAGCGCGAC
AAATACATGT CCAAGACCCA CGTGGCCACT GCGGGCGGCT TTGTGCTGTC TGCTGTGCTG
GCCATTCTGG TGCATGGTTT TGGCCTGCAG AGCAAGATCC TCGGCTATGC ACTGCTGGTA
GCCACGGTGA TCATGTTCAC CGGTGCCATC TTTGTCTTCA AACGCCGCCT CAACCCGCCC
TCTCGTCTGT CCAAGGGCCC GTGGATGCGC CTGCCGAAGA GTTTGCTGGC GTTCGCCGTG
AGCTTCTTCA TTGCCACCCT GCCGGTCGCC GGTATCCTGC CGGCCAACAC CGGTGGCTGG
GTGATGGTCG CCATTCTGGG CCTGGGCGTG CTGTGGGGTG TGTCGGAGCT GTTCTTTGGC
ATGACCTGGG GCGGCCCGAT GAAGCACGCC TTCGCCGGTG CCTTGCACCT GGCCTGGCAC
CGCCGTGCCG ATCGCTTCGG CGGCGGCCGC TCCACCGGCC TCAAGCCGTT GGACCTGGAA
GACCCGAACG CACCCCTTGG CGTGGAAAAG CCGGTGGACT TCACCTGGAA CCAGCTGCTG
GGCTTCGATG CCTGCGTGCA GTGCGGTAAA TGTGAAGCCA TGTGCCCGGC CTTTGCCGCT
GGCCAGCCGC TGAACCCGAA AAAACTCATC CAGGACATGG TCATCGGCCT TGCCGGTGGC
ACTGACGCGC AATTTGCCGG TAGCCCATAC CCTGGCAAAC CAATCGGCGA ACACGGCGGC
AATCCACACC AGCCGATCGT CAATGGCCTG GTCGACGCCG AAACGCTGTG GTCCTGCACC
ACCTGCCGTG CCTGCGTCGA GGAGTGCCCG ATGATGATCG AGCACGTCGA TGCCATCGTC
GACATGCGCC GCCACCTCAC CCTGGAAAAG GGCGCAACCC CGAACAAGGG CGCCGAGGTG
CTGGACAACC TGATCGCCAC CGACAACCCC GGCGGCTTCG CCCCCGGCGG GCGCATGAAC
TGGGCTGCCG ACCTTAATCT GCGGCTGCTG TCTGAAGTGA AAGCGACCGA AGTGTTGTTC
TGGGTCGGTG ATGGTGCCTT CGACATGCGT AACCAACGCA CTTTGCGTTC GTTTGTCAAA
GTATTGAAAG CCTCGGGTGT GGACTTCGCC GTACTCGGCC TGGAAGAGCG CGACAGCGGC
GACGTGGCGC GTCGTCTGGG CGATGAGGCG ACCTTCCAGC AACTGGCCAA GCGCAATATC
CAGACCTTGG CCAAGTACAA GTTCCAGCGC ATCGTCACCT GCGACCCGCA CAGCTTCCAT
GTGCTGAAGA ACGAATACGG CGCCCTGGGT GGTGACTACC AGGTGCAGCA CCACAGCACC
TACATCGCCG AACTGATCGC GGCCAAGAAG CTCAACCTGG GCCAACACAA GGGCGGCAGC
GTCACCTACC ACGATCCGTG CTACCTGGGC CGCTACAACG GCGAGTACGA AGCCCCGCGC
GAAGTGCTCA AGGCGCTGGG TATCGAGGTG CGCGAGATGC AGCGTTCGGG CTTCCGTTCC
CGTTGCTGCG GTGGTGGTGG CGGTGCGCCG ATCACTGACA TCCCTGGCAA GCAGCGTATT
CCCGATATGC GCATGGACGA CATTCGTGAG ACCGAGGCCG AGCTGGTAGC CGTGGGTTGC
CCGCAGTGCA CCGCCATGCT TGAAGGCGTG GTCGAGCCGC GCCCACAGAT CAAGGACTTG
GCCGAACTGG TGGCCGACGT GCTGATCGAG GAGGACGCAT CCACTGTCCC AAAGCCGCAA
ACGGCTAAAC GTGAACCTGC GGAGGTGCAC TGA
 
Protein sequence
MLNTLLPILL FAALGLAVLG ALRRVRMWRR GRPSKVNLIG GLLAMPRRYL VDLHHVVERD 
KYMSKTHVAT AGGFVLSAVL AILVHGFGLQ SKILGYALLV ATVIMFTGAI FVFKRRLNPP
SRLSKGPWMR LPKSLLAFAV SFFIATLPVA GILPANTGGW VMVAILGLGV LWGVSELFFG
MTWGGPMKHA FAGALHLAWH RRADRFGGGR STGLKPLDLE DPNAPLGVEK PVDFTWNQLL
GFDACVQCGK CEAMCPAFAA GQPLNPKKLI QDMVIGLAGG TDAQFAGSPY PGKPIGEHGG
NPHQPIVNGL VDAETLWSCT TCRACVEECP MMIEHVDAIV DMRRHLTLEK GATPNKGAEV
LDNLIATDNP GGFAPGGRMN WAADLNLRLL SEVKATEVLF WVGDGAFDMR NQRTLRSFVK
VLKASGVDFA VLGLEERDSG DVARRLGDEA TFQQLAKRNI QTLAKYKFQR IVTCDPHSFH
VLKNEYGALG GDYQVQHHST YIAELIAAKK LNLGQHKGGS VTYHDPCYLG RYNGEYEAPR
EVLKALGIEV REMQRSGFRS RCCGGGGGAP ITDIPGKQRI PDMRMDDIRE TEAELVAVGC
PQCTAMLEGV VEPRPQIKDL AELVADVLIE EDASTVPKPQ TAKREPAEVH