Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0332 |
Symbol | |
ID | 5191365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 377517 |
End bp | 379469 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640584778 |
Product | hypothetical protein |
Protein accession | YP_001265689 |
Protein GI | 148545587 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0251968 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.525566 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGAACA CCCTTCTACC CATCCTGCTG TTCGCTGCCC TTGGCCTGGC AGTGCTCGGT GCCTTGCGCC GGGTGCGCAT GTGGCGCCGT GGCCGGCCGT CCAAGGTCAA CCTGATCGGC GGCCTGCTGG CCATGCCGCG GCGCTACCTG GTGGACCTGC ACCACGTGGT TGAGCGCGAC AAATACATGT CCAAGACCCA CGTGGCCACT GCGGGCGGCT TTGTGCTGTC TGCTGTGCTG GCCATTCTGG TGCATGGTTT TGGCCTGCAG AGCAAGATCC TCGGCTATGC ACTGCTGGTA GCCACGGTGA TCATGTTCAC CGGTGCCATC TTTGTCTTCA AACGCCGCCT CAACCCGCCC TCTCGTCTGT CCAAGGGCCC GTGGATGCGC CTGCCGAAGA GTTTGCTGGC GTTCGCCGTG AGCTTCTTCA TTGCCACCCT GCCGGTCGCC GGTATCCTGC CGGCCAACAC CGGTGGCTGG GTGATGGTCG CCATTCTGGG CCTGGGCGTG CTGTGGGGTG TGTCGGAGCT GTTCTTTGGC ATGACCTGGG GCGGCCCGAT GAAGCACGCC TTCGCCGGTG CCTTGCACCT GGCCTGGCAC CGCCGTGCCG ATCGCTTCGG CGGCGGCCGC TCCACCGGCC TCAAGCCGTT GGACCTGGAA GACCCGAACG CACCCCTTGG CGTGGAAAAG CCGGTGGACT TCACCTGGAA CCAGCTGCTG GGCTTCGATG CCTGCGTGCA GTGCGGTAAA TGTGAAGCCA TGTGCCCGGC CTTTGCCGCT GGCCAGCCGC TGAACCCGAA AAAACTCATC CAGGACATGG TCATCGGCCT TGCCGGTGGC ACTGACGCGC AATTTGCCGG TAGCCCATAC CCTGGCAAAC CAATCGGCGA ACACGGCGGC AATCCACACC AGCCGATCGT CAATGGCCTG GTCGACGCCG AAACGCTGTG GTCCTGCACC ACCTGCCGTG CCTGCGTCGA GGAGTGCCCG ATGATGATCG AGCACGTCGA TGCCATCGTC GACATGCGCC GCCACCTCAC CCTGGAAAAG GGCGCAACCC CGAACAAGGG CGCCGAGGTG CTGGACAACC TGATCGCCAC CGACAACCCC GGCGGCTTCG CCCCCGGCGG GCGCATGAAC TGGGCTGCCG ACCTTAATCT GCGGCTGCTG TCTGAAGTGA AAGCGACCGA AGTGTTGTTC TGGGTCGGTG ATGGTGCCTT CGACATGCGT AACCAACGCA CTTTGCGTTC GTTTGTCAAA GTATTGAAAG CCTCGGGTGT GGACTTCGCC GTACTCGGCC TGGAAGAGCG CGACAGCGGC GACGTGGCGC GTCGTCTGGG CGATGAGGCG ACCTTCCAGC AACTGGCCAA GCGCAATATC CAGACCTTGG CCAAGTACAA GTTCCAGCGC ATCGTCACCT GCGACCCGCA CAGCTTCCAT GTGCTGAAGA ACGAATACGG CGCCCTGGGT GGTGACTACC AGGTGCAGCA CCACAGCACC TACATCGCCG AACTGATCGC GGCCAAGAAG CTCAACCTGG GCCAACACAA GGGCGGCAGC GTCACCTACC ACGATCCGTG CTACCTGGGC CGCTACAACG GCGAGTACGA AGCCCCGCGC GAAGTGCTCA AGGCGCTGGG TATCGAGGTG CGCGAGATGC AGCGTTCGGG CTTCCGTTCC CGTTGCTGCG GTGGTGGTGG CGGTGCGCCG ATCACTGACA TCCCTGGCAA GCAGCGTATT CCCGATATGC GCATGGACGA CATTCGTGAG ACCGAGGCCG AGCTGGTAGC CGTGGGTTGC CCGCAGTGCA CCGCCATGCT TGAAGGCGTG GTCGAGCCGC GCCCACAGAT CAAGGACTTG GCCGAACTGG TGGCCGACGT GCTGATCGAG GAGGACGCAT CCACTGTCCC AAAGCCGCAA ACGGCTAAAC GTGAACCTGC GGAGGTGCAC TGA
|
Protein sequence | MLNTLLPILL FAALGLAVLG ALRRVRMWRR GRPSKVNLIG GLLAMPRRYL VDLHHVVERD KYMSKTHVAT AGGFVLSAVL AILVHGFGLQ SKILGYALLV ATVIMFTGAI FVFKRRLNPP SRLSKGPWMR LPKSLLAFAV SFFIATLPVA GILPANTGGW VMVAILGLGV LWGVSELFFG MTWGGPMKHA FAGALHLAWH RRADRFGGGR STGLKPLDLE DPNAPLGVEK PVDFTWNQLL GFDACVQCGK CEAMCPAFAA GQPLNPKKLI QDMVIGLAGG TDAQFAGSPY PGKPIGEHGG NPHQPIVNGL VDAETLWSCT TCRACVEECP MMIEHVDAIV DMRRHLTLEK GATPNKGAEV LDNLIATDNP GGFAPGGRMN WAADLNLRLL SEVKATEVLF WVGDGAFDMR NQRTLRSFVK VLKASGVDFA VLGLEERDSG DVARRLGDEA TFQQLAKRNI QTLAKYKFQR IVTCDPHSFH VLKNEYGALG GDYQVQHHST YIAELIAAKK LNLGQHKGGS VTYHDPCYLG RYNGEYEAPR EVLKALGIEV REMQRSGFRS RCCGGGGGAP ITDIPGKQRI PDMRMDDIRE TEAELVAVGC PQCTAMLEGV VEPRPQIKDL AELVADVLIE EDASTVPKPQ TAKREPAEVH
|
| |