| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0325 |
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| Symbol | |
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| ID | 5191508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 370505 |
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| End bp | 371452 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640584771 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001265682 |
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| Protein GI | 148545580 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.416285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGAGA CGATTGCCTT TCTGTTGGTG CCCGGCTTTT CTGCCATGGG GTTCATTTCG
GCGGTGGAGC CACTGCGGGT GGCCAATCGT TTTGGCGGGC AGTTGTACCG GTGGCAGGTG
CTTAGCCTGG ACGGTGAGGC GGTGCTGGCG AGCAATGGCA TGTCGATCAA TGCCGATGCC
GCCCTGGGGG AGGGGGAGCC GGCCAACATC CTGCTGGTGG TTGCGGGCTT TGAGCCTTTG
GCCAATGTCG CACCCAAACT GCTGCATGCG CTGCGCCGGC TCAACCACGA AGCTGTCATG
CTCGGTGGCA TCGACACGGG CGCAATGGTG CTGGCCGAGG CAGGGCTGCT CGAGGGCTAC
CGGGCGACAT TGCATTGGGA GGCGCTTGAG GCATTCAAGG AACGCTATCC AGGCCTTCAA
GCCACCCAGG AGCTGTTCGA GATTGACCGC AGCCGTATCA CCTGTGCCGG CGGAACGGCC
TCGATCGATT TGATGCTGCA CCTGATTGCC CAGTCTCACG GCAGCGAACT GGCGGTCAAG
GTGTCCGAGC AGTTCGTGCT GGGTCGTATC CGTCAGCGCC AGGACCACCA GCGCATGCAG
ATCGGTGCGC GTTATGGCAT CAGCAACAAG AAGCTGGTCC ATGCCATTGG CGAAATGGAA
AAACACATCG AGCCACCGTT GAGTACGCTG GAACTGGCTG CCGCGATCAA GGTGACACGG
CGTCAACTGG AGCGTTTGTT TCGCATGCAC CTTGATGCAA CCCCGAGCGG TTTCTATCTC
GGGTTACGGC TGGACAAGGC GCGCCAGCTG TTGGCCCAGA CCGACATGTC GGTGACTGAA
GTCAGCCTTG CGTGCGGGTT TGAACTGCCA TCCTATTTCA CGCGGCGCTA CAAGCTGAGG
TTTGGACGGT GCCCGCGGGA GGAGCGACGG CCCAGCGGTA CAAAGTGA
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| Protein sequence | MMETIAFLLV PGFSAMGFIS AVEPLRVANR FGGQLYRWQV LSLDGEAVLA SNGMSINADA
ALGEGEPANI LLVVAGFEPL ANVAPKLLHA LRRLNHEAVM LGGIDTGAMV LAEAGLLEGY
RATLHWEALE AFKERYPGLQ ATQELFEIDR SRITCAGGTA SIDLMLHLIA QSHGSELAVK
VSEQFVLGRI RQRQDHQRMQ IGARYGISNK KLVHAIGEME KHIEPPLSTL ELAAAIKVTR
RQLERLFRMH LDATPSGFYL GLRLDKARQL LAQTDMSVTE VSLACGFELP SYFTRRYKLR
FGRCPREERR PSGTK
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