Gene Pput_0323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0323 
Symbol 
ID5190379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp368408 
End bp369292 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content65% 
IMG OID640584769 
Producthypothetical protein 
Protein accessionYP_001265680 
Protein GI148545578 
COG category[S] Function unknown 
COG ID[COG3246] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.198912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCACG ACGTCATCAT CACCTGCGCC CTCACCGGCG CCGGCGACAC CGCCTCGAAA 
AGCCACCTGG TCCCGGTCAC GCCCAAACAG ATCGCCGAAT CCGCCGTAGA GGCCGCCAAG
GCCGGCGCCA CCGTGGTCCA CTGCCACGTC CGCGACCCAC AGACCGGCCG TTTCAGCCGT
GATGTAAACC TCTACCGCGA AGTCATGGAG CGTATCCGCG AAGCCGACGT GGACATCATC
GTCAACCTCA CCGCCGGCAT GGGCGGCGAC CTGGAAATCG GCCCGGGTGA AACGCCGCTG
GCGTTCGGCC CGGGCACCGA CCTGATCGGC CCGCTGGAGC GCCTGGCCCA TGTCGAAGCA
CTGTTGCCGG AAATCTGCAC CCTCGACTGC GGCACCCTCA ACTTCGGCGA TGGCAACTCG
ATCTACGTGT CCACCCCGGC CCAACTGCGC GCCGGCGCCA AGCGCATTAC CGAACTGGGG
GTGAAGGCCG AGCTGGAAAT CTTCGACACC GGCCACCTGT GGTTCGCCAA GCAAATGATG
AAGGAAGGCC TGCTTGAAGA CCCGTTGTTC CAGCTGTGCC TGGGCATCCC GTGGGGCGCA
CCGGCCGACA CCACCACCAT GAAGGCCATG GTCGACAACC TGCCTGCCAA CGTCACTTGG
GCCGGCTTCG GCATCGGCCG CATGCAGATG CCCATGGCCG CGCAGGCCGT GTTGCTCGGC
GGGAATGTGC GGGTGGGCCT GGAAGACAAC TTGTATCTGG ACCGTGGCGT GCTGGCCAGC
AATGGCCAAC TGGTGGAACG CGCAAGCGAG ATCATCACCC GCATGGGTGG CCGCGTGCTC
AGCCCGGCAG AAGGTCGGGA AAAAATGAAC CTCAAGCGCC GCTGA
 
Protein sequence
MNHDVIITCA LTGAGDTASK SHLVPVTPKQ IAESAVEAAK AGATVVHCHV RDPQTGRFSR 
DVNLYREVME RIREADVDII VNLTAGMGGD LEIGPGETPL AFGPGTDLIG PLERLAHVEA
LLPEICTLDC GTLNFGDGNS IYVSTPAQLR AGAKRITELG VKAELEIFDT GHLWFAKQMM
KEGLLEDPLF QLCLGIPWGA PADTTTMKAM VDNLPANVTW AGFGIGRMQM PMAAQAVLLG
GNVRVGLEDN LYLDRGVLAS NGQLVERASE IITRMGGRVL SPAEGREKMN LKRR