| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0318 |
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| Symbol | |
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| ID | 5191817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 363225 |
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| End bp | 364331 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640584764 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001265675 |
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| Protein GI | 148545573 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.120478 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCGT ACACCTCCGG GAATCCAACC CAGAACCGCA CAACACCCCA GTCCATCGGG
TTTCTTCTAT TGGACAATTT CACCCTGATT TCCCTGGCAT CGGCGGTCGA GCCGCTGCGC
ATGGCCAACC AGCTGTCTGG CCGTGAGCTG TATCGTTGGC ACACGCTGAC CATCGATGGC
GGCCAGGTGT GGGCCAGCGA TGGTCTGCAA ATCACACCGG ATGCCGCCAT CAGCAATGCT
CCGCCTATCG ACACCGTGAT TGTCTGTGGT GGTGTTGGCA TCCAGCGTTC CGTCACCCGT
GAACACGTCA CCTGGCTGCA AGCCCAGGCC CGTCAGTCGC GCAGGTTGGG TGCCGTGTGC
ACCGGCAGTT GGGCACTGGC CTGCGCTGGC CTGCTCGACG GCTTCGATTG CAGCGTGCAC
TGGGAATGCC TGGCCGCAAT GCAGGAAGCC TTCCCGCGGG TGAACATGAG CACCCGCCTG
TTCACCCTTG ACCGCAACCG CTTCACCAGC TCCGGTGGCA CCGCGCCGCT GGACATGATG
CTGCACCTGA TCAGCCGTGA TCACGGCCGC GAGTTGTCGG CGGCGATCTC CGAGATGTTC
GTCTACGAGC GTATTCGCAA CGAGCAGGAC CACCAGCGTG TGCCGCTCAA ACATATGCTT
GGCACCAACC AGCCGAAGTT GCAGGAAATC GTCGCGTTGA TGGAGGCCAA TCTGGAGGAA
CCGATCGACC TGGACGAACT GGCGGTCTAT GTGGCGGTTT CGCGGCGTCA GCTGGAGCGC
CTGTTCCAGA AGTACCTGCA CTGCTCACCT TCGCGCTACT ACCTGAAGTT GCGCCTGATC
CGTGCGCGGC AGTTGCTGAA GCAGACGCCG ATGTCGATCA TCGAAGTGGC ATCGGTGTGC
GGCTTCGTGT CGACCCCGCA CTTCTCCAAG TGCTATCGCG AGTACTTCGG TATTCCACCG
CGTGACGAGC GCGTGGGCTC CAACACCGCG CAGCAGGTGG CCATGATGCC GATTCCGCAG
GCCATGACCC TGTCGCCACA CAGCGGGCCG ATGGCGGCCC TGAGCCAGGC ACGCAACGAG
TCGACATTTG CCAGTGTAAG GCTCTGA
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| Protein sequence | MTSYTSGNPT QNRTTPQSIG FLLLDNFTLI SLASAVEPLR MANQLSGREL YRWHTLTIDG
GQVWASDGLQ ITPDAAISNA PPIDTVIVCG GVGIQRSVTR EHVTWLQAQA RQSRRLGAVC
TGSWALACAG LLDGFDCSVH WECLAAMQEA FPRVNMSTRL FTLDRNRFTS SGGTAPLDMM
LHLISRDHGR ELSAAISEMF VYERIRNEQD HQRVPLKHML GTNQPKLQEI VALMEANLEE
PIDLDELAVY VAVSRRQLER LFQKYLHCSP SRYYLKLRLI RARQLLKQTP MSIIEVASVC
GFVSTPHFSK CYREYFGIPP RDERVGSNTA QQVAMMPIPQ AMTLSPHSGP MAALSQARNE
STFASVRL
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