| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0315 |
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| Symbol | |
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| ID | 5194745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 359017 |
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| End bp | 359862 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640584761 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001265672 |
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| Protein GI | 148545570 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | [TIGR03416] choline ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.247617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0422792 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTATCG ATCAGAAAAT ACCTCTGGGC CAGTACATCG CGTCGTTCGT CGAATGGCTG
ACCCAGAACG GCGCGAATTA CTTCGACGCC ATCGCGCAAG GCCTGGAGTT CATGATCCAT
GGCGTCACCA GCGCCCTGAC TTTCTTCAAC CCGTTCGTGC TTATCGCCCT GTTCGCCGCC
CTGGCGCACT TCATCCAGCG CAAGTGGGCC CTGACCGCAT TTGTCGCCCT GTCGTTCCTG
CTGATCCTCA ACCTGGGATA CTGGCAGGAA ACCATGGAAA CCCTGGCGCA GGTCACCTTC
GCCACGGTGG TATGTGTGGT GATCGGCGTG CCACTGGGCA TCCTCGCCGC GCACAAGCCG
ATGTTCTATA CCGCCATGCG CCCGGTGCTC GACCTGATGC AGACGGTGCC CACCTTCGTC
TACCTGATCC CAACCCTGAC CCTGTTCGGC CTGGGCGTGG TGCCGGGGCT GATTTCCACC
GTGGTGTTCG CCATCGCCGC GCCCATTCGC CTGACCTACC TGGGCATCTG CGACGTGCCG
CAAGAGTTGA TGGACGCCGG CAAGGCCTTT GGCTGCTCGC GTCGTCAACT GCTTACCCGT
ATCGAACTGC CGCACGCGAT GCCAAGCATC GCCGCCGGTG TCACTCAATG CATCATGCTG
TCGCTGTCGA TGGTGGTCAT TGCCGCCCTG GTTGGCGCTG ACGGCCTGGG CAAACCTGTG
GTCAACGCAC TGAACACCGC CGATATCTCC CTGGGCTTCG AAGCGGGCCT GGCGATCGTG
CTGCTGGCAA TCATGCTCGA CCGTATCTGC AAGCAACCGG AACTGCCGGT AAGGGGTGAG
GCATGA
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| Protein sequence | MLIDQKIPLG QYIASFVEWL TQNGANYFDA IAQGLEFMIH GVTSALTFFN PFVLIALFAA
LAHFIQRKWA LTAFVALSFL LILNLGYWQE TMETLAQVTF ATVVCVVIGV PLGILAAHKP
MFYTAMRPVL DLMQTVPTFV YLIPTLTLFG LGVVPGLIST VVFAIAAPIR LTYLGICDVP
QELMDAGKAF GCSRRQLLTR IELPHAMPSI AAGVTQCIML SLSMVVIAAL VGADGLGKPV
VNALNTADIS LGFEAGLAIV LLAIMLDRIC KQPELPVRGE A
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