| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0313 |
|---|
| Symbol | |
|---|
| ID | 5195554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 356933 |
|---|
| End bp | 357703 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640584759 |
|---|
| Product | imidazole glycerol phosphate synthase subunit HisF |
|---|
| Protein accession | YP_001265670 |
|---|
| Protein GI | 148545568 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.500455 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0126582 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTGG CCAAGCGCAT TATCCCTTGC CTGGACGTGG ACAACGGCCG GGTGGTCAAG
GGCGTCAAGT TCGAGAACAT CCGTGATGCC GGCGACCCGG TGGAAATCGC CCGTCGCTAC
GACGAGCAAG GTGCTGACGA AATCACCTTT CTCGACATCA CTGCCAGCGT CGATGGCCGC
GACACCACTT TGCATACCGT CGAGCGCATG GCCAGCCAGG TGTTCATCCC GCTGACGGTA
GGGGGTGGCG TGCGGACCGT GCAGGACATC CGCAACCTGC TCAACGCCGG TGCCGACAAG
GTCTCGATCA ACACCGCCGC GGTGTTCAAC CCAGAGTTTG TTGGCGAGGC GGCGGACCGT
TTCGGTTCGC AGTGCATCGT TGTCGCCATC GATGCCAAGA AAGTGTCCGG GCCAGGTGAA
GCGCCGCGCT GGGAGATTTT CACTCACGGC GGGCGCAAAC CGACTGGGCT GGATGCGGTC
GAGTGGGCGA AGAAGATGGA AGGCCTGGGC GCTGGCGAGA TCCTGCTGAC CAGCATGGAC
CAGGACGGCA TGAAGAACGG CTTCGACCTG GGCGTTACCC GCGCTATCAG TGATGCGCTG
GGGATTCCGG TGATTGCCTC GGGGGGTGTG GGTAACCTGC AGCACTTGGC TGACGGCATT
CTGGAGGGGC ATGCCAGCGC GGTGCTGGCG GCCAGCATCT TCCACTTTGG CGAGTACACA
GTGCCTGAAG CCAAGGCTTA CATGGCTTCG CGCGGGATCG TCGTTCGCTG A
|
|---|
| Protein sequence | MALAKRIIPC LDVDNGRVVK GVKFENIRDA GDPVEIARRY DEQGADEITF LDITASVDGR
DTTLHTVERM ASQVFIPLTV GGGVRTVQDI RNLLNAGADK VSINTAAVFN PEFVGEAADR
FGSQCIVVAI DAKKVSGPGE APRWEIFTHG GRKPTGLDAV EWAKKMEGLG AGEILLTSMD
QDGMKNGFDL GVTRAISDAL GIPVIASGGV GNLQHLADGI LEGHASAVLA ASIFHFGEYT
VPEAKAYMAS RGIVVR
|
|---|
| |