Gene Pput_0306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0306 
Symbol 
ID5191422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp349155 
End bp350222 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content67% 
IMG OID640584752 
ProductA/G-specific adenine glycosylase 
Protein accessionYP_001265663 
Protein GI148545561 
COG category[L] Replication, recombination and repair 
COG ID[COG1194] A/G-specific DNA glycosylase 
TIGRFAM ID[TIGR01084] A/G-specific adenine glycosylase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0367853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCCG AGCAGTTCTC CAGCGCAGTG CTGGACTGGT ATGACGAGCA CGGCCGGCAC 
GACCTGCCCT GGCAACAGGG CATCACGCCG TACCGCGTGT GGGTGTCGGA AATCATGTTG
CAGCAGACCC AGGTCAGCAC CGTGCTCAAT TACTTCGACC GCTTCATGCA GGCCCTGCCA
ACCGTGCAAG CCCTGGCCGA GGCACCGGAG GACGAAGTGC TGCACCTGTG GACGGGCCTG
GGTTACTACA CCCGCGCACG CAACCTGCAA AAGGCCGCCA AGGTCGTCGT CGAGCAACAT
GGCGGCGAAT TCCCGCGCAG CGTCGAGCAG CTTACCGAGC TGCCCGGCAT TGGCCGCTCA
ACTGCCGGCG CCATCGCCAG CATCAGCATG GGCATCCGTG CACCGATCCT CGACGGCAAC
GTCAAGCGCG TGCTGGCACG CTACACCGCC CAGGCCGGCT ACCCCGGCGA ACCCAAGGTT
GCCAACCAGC TATGGGCCAC TGCCGAGCGC CTTACCCCGC AACAACGCGC CAACCACTAC
ACCCAGGCGA TGATGGACAT GGGCGCCACG CTGTGCACGC GCAGCAAGCC CAGTTGCCTG
ATCTGCCCGT TGCAGCGCGG CTGCGAAGCG CACCTGCACG GTGAAGAAAC CCGCTACCCC
GAGCCCAAAC CGCGCAAGGC GCTGCCGCAA CGGCGCACAC TGATGCCACT GCTGGCCAAC
CACGAAGGCG CCATCCTGCT TTACCGCCGC CCTTCCAGCG GCCTGTGGGG TGGTTTGTGG
AGCCTCCCGG AGCTGGACGA CATCGCCCAG CTCGACGACC TGGCCTACCA GCACGGCCTG
CGCCTGGCTG GCCGCCACGC CATGGACGGC CTGACCCACA CCTTCAGCCA CTTCCAGCTG
GCGATCGAGC CTTGGCTCGT GCGCGTCGAC CCGGTCGGCG AGCACGTGGT CGAGGCCGAC
TGGCTCTGGT ATAACCTCGC CACCCCGCCG CGCCTGGGCC TCGCCGCCCC GGTGAAAAAG
CTGCTTGAAC GCGCGACCGA CGAACTGATT GCAGGAGACG CCCGATGA
 
Protein sequence
MSPEQFSSAV LDWYDEHGRH DLPWQQGITP YRVWVSEIML QQTQVSTVLN YFDRFMQALP 
TVQALAEAPE DEVLHLWTGL GYYTRARNLQ KAAKVVVEQH GGEFPRSVEQ LTELPGIGRS
TAGAIASISM GIRAPILDGN VKRVLARYTA QAGYPGEPKV ANQLWATAER LTPQQRANHY
TQAMMDMGAT LCTRSKPSCL ICPLQRGCEA HLHGEETRYP EPKPRKALPQ RRTLMPLLAN
HEGAILLYRR PSSGLWGGLW SLPELDDIAQ LDDLAYQHGL RLAGRHAMDG LTHTFSHFQL
AIEPWLVRVD PVGEHVVEAD WLWYNLATPP RLGLAAPVKK LLERATDELI AGDAR