Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0306 |
Symbol | |
ID | 5191422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 349155 |
End bp | 350222 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640584752 |
Product | A/G-specific adenine glycosylase |
Protein accession | YP_001265663 |
Protein GI | 148545561 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1194] A/G-specific DNA glycosylase |
TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0367853 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCCG AGCAGTTCTC CAGCGCAGTG CTGGACTGGT ATGACGAGCA CGGCCGGCAC GACCTGCCCT GGCAACAGGG CATCACGCCG TACCGCGTGT GGGTGTCGGA AATCATGTTG CAGCAGACCC AGGTCAGCAC CGTGCTCAAT TACTTCGACC GCTTCATGCA GGCCCTGCCA ACCGTGCAAG CCCTGGCCGA GGCACCGGAG GACGAAGTGC TGCACCTGTG GACGGGCCTG GGTTACTACA CCCGCGCACG CAACCTGCAA AAGGCCGCCA AGGTCGTCGT CGAGCAACAT GGCGGCGAAT TCCCGCGCAG CGTCGAGCAG CTTACCGAGC TGCCCGGCAT TGGCCGCTCA ACTGCCGGCG CCATCGCCAG CATCAGCATG GGCATCCGTG CACCGATCCT CGACGGCAAC GTCAAGCGCG TGCTGGCACG CTACACCGCC CAGGCCGGCT ACCCCGGCGA ACCCAAGGTT GCCAACCAGC TATGGGCCAC TGCCGAGCGC CTTACCCCGC AACAACGCGC CAACCACTAC ACCCAGGCGA TGATGGACAT GGGCGCCACG CTGTGCACGC GCAGCAAGCC CAGTTGCCTG ATCTGCCCGT TGCAGCGCGG CTGCGAAGCG CACCTGCACG GTGAAGAAAC CCGCTACCCC GAGCCCAAAC CGCGCAAGGC GCTGCCGCAA CGGCGCACAC TGATGCCACT GCTGGCCAAC CACGAAGGCG CCATCCTGCT TTACCGCCGC CCTTCCAGCG GCCTGTGGGG TGGTTTGTGG AGCCTCCCGG AGCTGGACGA CATCGCCCAG CTCGACGACC TGGCCTACCA GCACGGCCTG CGCCTGGCTG GCCGCCACGC CATGGACGGC CTGACCCACA CCTTCAGCCA CTTCCAGCTG GCGATCGAGC CTTGGCTCGT GCGCGTCGAC CCGGTCGGCG AGCACGTGGT CGAGGCCGAC TGGCTCTGGT ATAACCTCGC CACCCCGCCG CGCCTGGGCC TCGCCGCCCC GGTGAAAAAG CTGCTTGAAC GCGCGACCGA CGAACTGATT GCAGGAGACG CCCGATGA
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Protein sequence | MSPEQFSSAV LDWYDEHGRH DLPWQQGITP YRVWVSEIML QQTQVSTVLN YFDRFMQALP TVQALAEAPE DEVLHLWTGL GYYTRARNLQ KAAKVVVEQH GGEFPRSVEQ LTELPGIGRS TAGAIASISM GIRAPILDGN VKRVLARYTA QAGYPGEPKV ANQLWATAER LTPQQRANHY TQAMMDMGAT LCTRSKPSCL ICPLQRGCEA HLHGEETRYP EPKPRKALPQ RRTLMPLLAN HEGAILLYRR PSSGLWGGLW SLPELDDIAQ LDDLAYQHGL RLAGRHAMDG LTHTFSHFQL AIEPWLVRVD PVGEHVVEAD WLWYNLATPP RLGLAAPVKK LLERATDELI AGDAR
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