| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0300 |
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| Symbol | |
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| ID | 5191244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 343180 |
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| End bp | 343932 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640584745 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001265657 |
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| Protein GI | 148545555 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.639045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.100336 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACCT ACAAGAAGTT TCTCCTGGCA GCTGCTGCCA CGCTGGTGAT GTCGGCAAAC
GCCATGGCCG CAGAAAAACT GCGCATGGGC ATCGAAGCCG CCTACCCACC GTTCAACAAC
AAGGATGCCA GCGGTAACGT GGTTGGCTTC GACAAAGACA TTGGCGACGC CCTGTGCGCC
AAGATGAAAG TCGAATGCTC GGTCGTTACC TCCGACTGGG ACGGCATCAT CCCGGCCCTG
AACGCCAAGA AGTTCGACTT CCTGGTGTCG TCGCTGTCGA TCACCGACGA ACGCAAACAG
GCTGTGGACT TCACCGAGCC GTACTACTCC AACAAGCTGC AGTTCATCGC GCCGAAAAAC
GTCGACTTCA AGACTGACAA AGAGTCGCTG AAAGGCAAGG TCATCGGCAC CCAGCGCGCA
ACCTTGGCCG GCACCTACCT TGAAGACAAC TTCAAGGGCG TCGACATCAA GCTGTACGAC
ACCCAGGAAA ACGCCTACCT CGACCTGGTC TCCGGTCGTA TCGACGGCAT CCTGGCCGAC
AAGTACGTGC AGTACGAGTG GCTGAAAAGC AAAGACGGCT CGAACTTCGA GTTCAAGGGC
GAGCCGGTGA TGGACAGCGA CAAGATCGGC ATTGCCGTGC GCAAAGGTGA TACCAAGCTG
CGCGACGACC TGAACAAAGC CCTGGCAGAA ATCAAAGCCG ACGGTACGTA CAAGAAAATC
AACGACAAGT ACTTCCCGTT CAGCATCGAA TGA
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| Protein sequence | MHTYKKFLLA AAATLVMSAN AMAAEKLRMG IEAAYPPFNN KDASGNVVGF DKDIGDALCA
KMKVECSVVT SDWDGIIPAL NAKKFDFLVS SLSITDERKQ AVDFTEPYYS NKLQFIAPKN
VDFKTDKESL KGKVIGTQRA TLAGTYLEDN FKGVDIKLYD TQENAYLDLV SGRIDGILAD
KYVQYEWLKS KDGSNFEFKG EPVMDSDKIG IAVRKGDTKL RDDLNKALAE IKADGTYKKI
NDKYFPFSIE
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