| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0297 |
|---|
| Symbol | |
|---|
| ID | 5195296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 340427 |
|---|
| End bp | 341632 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640584742 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001265654 |
|---|
| Protein GI | 148545552 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000071449 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.203067 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAGCC CCCTCCACAG CCACCACCTA AGCACCCGCT TCCAGGCCCT CGACCAGTTC
CTGATCGAGC ACCAACAGCT GTGGAAACCC CGCCCCTTCA CCACCCTGCA ACTGCCCTGG
GAAACCACCC ACCCCGAACT CGCCACCCAC CTGCGCCAAT GTTCCCTGGC AGACGCCGAA
GCCGACAGCG CCGCTGACCG CTTGCCCGCG CCCTTCCCGC AACTGGCCGA ACAAGCCCAA
AAGCTCGCCG CCCTCGGCAG CCTCCCTCAG ACTGACCTGC CACCCGCCGC CCACCGCCTG
GACGTCGCCG TCCCCGGCCG CAAATGGCAG CAGATCGAAG CCTTCGCCAG CCACCTGGCC
TTCCGCGAGC CGCCCCGCCA CTGGCTGGAC TGGTGCTCCG GCAAAGGCCA CCTCGGCCGT
CGCCTGCTGC AACCCGGCCA ACAGCTGACC TGCCTGGAGT ACGACGCCGA ACTGGTCGCC
GCCGGCCAGG CCCTGAGCGC CCACCATCAC TTGCCAGCAC AGCACGTACA CCAGGATGTG
ATGGCCAGCA ACAGCGCCCG CCACCTGGCT AGCGACAAAA GCGTGGTCGC CCTGCACGCC
TGTGGCGATC TGCATGTACG CCTGCTGCAA CTGGCCAGCC AGCAAGGTTG CCGGCAACTG
GCCATAGCCC CCTGCTGCTA CAACCGCATC GCCGCGCAGC AATACCAGGC GTTATCCACA
GCCGCGCAGG CGTCCAGCCT GCAGCTGTCG CTGGACGACC TGGGCCTGCC CTTGAGCGAA
ACCGTCACTG CCGGCGCCCG CGTGCGGCGC CAGCGCGACA CCTCGATGGC CCGGCGCCTG
GGCTTCGACC TGCTGCAACG CCAGCAGCGC CAGAGCGATG AATACCTGCC GACGCCTTCC
CTGCCGGTGG CCTGGCTGGA GAAGCCCTTC GAGCAATACT GCCGCGACTT GGCTGAACTG
AAGCAATTGC CAGTGAGCGG CGACCCGGAC TGGGCAATGC TGGAAGCTGC GGGCTGGCAA
CGCCTGGCCG AGGTTCGGAA CCTGGAGCGC GTACGCAACC TGTTCCGTCG GCCACTGGAG
CTGTGGCTGG TACTCGATCG CGCCCTGTTC CTCGAAGAAC AAGGCTATGA CGTGCGCCTG
GGCCTGTTTT GCGATTACCC ACTGACCCCG CGCAACCTGC TCATTCTCGC GGAACGCGAC
GGTTAG
|
|---|
| Protein sequence | MPSPLHSHHL STRFQALDQF LIEHQQLWKP RPFTTLQLPW ETTHPELATH LRQCSLADAE
ADSAADRLPA PFPQLAEQAQ KLAALGSLPQ TDLPPAAHRL DVAVPGRKWQ QIEAFASHLA
FREPPRHWLD WCSGKGHLGR RLLQPGQQLT CLEYDAELVA AGQALSAHHH LPAQHVHQDV
MASNSARHLA SDKSVVALHA CGDLHVRLLQ LASQQGCRQL AIAPCCYNRI AAQQYQALST
AAQASSLQLS LDDLGLPLSE TVTAGARVRR QRDTSMARRL GFDLLQRQQR QSDEYLPTPS
LPVAWLEKPF EQYCRDLAEL KQLPVSGDPD WAMLEAAGWQ RLAEVRNLER VRNLFRRPLE
LWLVLDRALF LEEQGYDVRL GLFCDYPLTP RNLLILAERD G
|
|---|
| |