Gene Pput_0286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0286 
Symbol 
ID5190826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp331651 
End bp333018 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content65% 
IMG OID640584731 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001265644 
Protein GI148545542 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.502891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTGGT TTCACCGGCT ATGGCCCCGC ACCTTGTTTG GTCAACTGCT GCTGATCATG 
GTCAGTGGCA CGCTGGTGAT CCAGTTGATG TCGAGCAGCA TCTGGTTCGA CGTGCGTTTC
GCTCAGGCGC TAGAGGTGCC CGTAAGACTG GTTGCTGCAC GCAGCGCCCC CCTGATTGCC
CAGGCCGACT GCCACCGCGG TACGCAGCAG GCGCCAGCCC ACTACCAGCT TCACTGCGTC
GAAAGCCCGC CTGCGCAAGA GCATGACGAG CGCCGCGGGC ACAGGCGGGT CGAGCTGTTG
TTGCAGCAGG CCCTGAAGTA CGAGCTGGGG CATGCCCAGG ACGTGCGCCT GATGAACGTG
CAACTCACCG ACGAACTGGG CCAGCCGATC GTCTGGCGCA GCCTGTTCGG CCTGCGCACG
GCCCAGGCGC ATATCCAGTT CGCGGTGCCG TTACCCGATG GCCACTGGCT GACCGTTGCG
GGCCAGGAAC TGCAGGGCTG GAGCGGCGAG TCGGCCTGGG TGCTGATCAG CGATTACCTG
CTGCGGGTGT ATGCGCTGCG CATCGTCGCG GTGCTGCTGG TATGCCTGGT TGCCGTGCGC
CTGTGCCTGC GCCCGTTGCG GCGCCTGGCC GATGCCGCAC GCGGCCTGGG TAGCAACCTC
GAGCAGCCTC CCCTGGCACT GGATGGCCCG GAGGAAGTGC GCCAGGCGGC GCAGGCATTC
AACGCGATGC AGCAGCGGCT GATTGCCATG GTCAACGACA AGGCCTACTT CCTGGCCGCC
GTGTCTCATG ACCTGCGCAC CCCACTCACC CGCATGCGCC TGCGTCTGGA GCGCTTACCC
GATGACGAAC ACCGCCAGCG CTTGCGGCAG AACATCACGC AGATGGACGA TATGATCGGT
CAGGTTCTGG ACTACCTGCG TGCGGGGGAG CAGCGGAATC TGCAGCAGGT GGACCTGGAC
CGATTGGTCG CGCGCCAGTG TGCGGACCTG GCCACTGCCG CAGAACCACT TCCCGTGCAC
GGCAAGGCGG GCAGCTTGCG GGTAGATGCC TTGCTGTTGC AGCGCTGCCT GCAAAACTTG
TTGGTCAACG CGTTGCGCTA CGCCAAGAAC ATTTCGGTCA CGTTGGAACG GGCCACCACA
GGTGTATTGA TCCATATCGA CGACTGCGGG CCAGGGATTG CCCCGGGCCT GCTGGCGACC
ATTACCGACC CCTTCGTGCG CGGTGACGGG TCGCGTAACC AGGCGTCCGG CGGATATGGA
TTGGGGTTGA GCATTGCCCA GCGGATCGCC ACCAGCCATG GGGGTGAGCT GATGCTGTCG
AACCGTGAGA GCGGTGGGTT GCGGGTCAGC ATACTGCTGC CTGGCTAA
 
Protein sequence
MRWFHRLWPR TLFGQLLLIM VSGTLVIQLM SSSIWFDVRF AQALEVPVRL VAARSAPLIA 
QADCHRGTQQ APAHYQLHCV ESPPAQEHDE RRGHRRVELL LQQALKYELG HAQDVRLMNV
QLTDELGQPI VWRSLFGLRT AQAHIQFAVP LPDGHWLTVA GQELQGWSGE SAWVLISDYL
LRVYALRIVA VLLVCLVAVR LCLRPLRRLA DAARGLGSNL EQPPLALDGP EEVRQAAQAF
NAMQQRLIAM VNDKAYFLAA VSHDLRTPLT RMRLRLERLP DDEHRQRLRQ NITQMDDMIG
QVLDYLRAGE QRNLQQVDLD RLVARQCADL ATAAEPLPVH GKAGSLRVDA LLLQRCLQNL
LVNALRYAKN ISVTLERATT GVLIHIDDCG PGIAPGLLAT ITDPFVRGDG SRNQASGGYG
LGLSIAQRIA TSHGGELMLS NRESGGLRVS ILLPG