| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0281 |
|---|
| Symbol | |
|---|
| ID | 5191184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 324156 |
|---|
| End bp | 325262 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640584726 |
|---|
| Product | agmatine deiminase |
|---|
| Protein accession | YP_001265639 |
|---|
| Protein GI | 148545537 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2957] Peptidylarginine deiminase and related enzymes |
|---|
| TIGRFAM ID | [TIGR03380] agmatine deiminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCC TCAACTCCAC GCCCCGTGCC GATGGTTTCC ACATGCCCGC CGAGTGGGCC
CCGCAGACTC AGGTGTGGAT GGTCTGGCCG GAGCGCCCGG ACAACTGGCG CCTGGGCGGC
AAGCCGGCGC AGGCTGCCCA CGTAACCCTG GCCAAAGCCA TTGCCCGTTT CGAACCTGTG
ACCGTCGCGG CCTCCGCCGG CCAGTACGAA AACGCCCGGC GCCAACTCGA CCAGCCGAAC
ATTCGTGTGG TTGAAATCAG CAACGACGAT GCCTGGGTGC GTGATACCGG CCCGACCTTT
GTCATCAACG GCCATGGCGA AGTGCGCGGT GTCGATTGGG GCTTCAATGC CTGGGGCGGC
TTCGACGGCG GCCTGTACGC ACCCTGGAAC CGCGACGAGG AACTGGCCGC CAAGGTGCTG
GAAATGGAGC GCTGCCAGCG CTACCAGACC GAAGGTTTTG TGCTTGAAGG TGGTTCGATC
CACGTAGACG GTGAAGGCAC CGTGATCACC ACTGAGGAAT GCCTGCTCAA CCGCAACCGC
AACCCGCACC TGAGCCGCGA GCAGATCGAA GCGGTGCTGC GCGATCACTT GGCGGTCGAC
ACCGTGGTAT GGCTGCCTGA TGGCTTGTAC AACGACGAAA CCGACGGCCA CGTCGACAAC
TTCTGCTGTT ACGTGCGCCC GGGCGAAGTG TTACTGGCCT GGACCGATGA TTCCAACGAC
CCCAACTATG CGCGCTGCCA CGCGGCCATG GATGTGCTGA AGAACACCCG CGACGCCAAG
GGCCGCGAGT TCATCGTGCA CAAGATGCCG ATCCCGGGTC CGCTGTACGC CACCGCCGAA
GAGTGCGCCG GTGTCGACCA GGTCGCCGGC AGCCAGGAGC GTGACCCGTC GGTGCGCCTG
GCGGGTTCGT ACGTGAACTT CCTGATTGTT AACGGTGGCA TCATTGCCCC AAGCTTCGAC
GACCCGGCAG ATGCCGAAGC CAGAGCGATC CTGGCAAGGA TCTTCCCCGA CCATGAGGTG
GTGATGATCC CGGGCCGCGA ACTGCTCTTG GGGGGCGGCA ACATCCACTG CCTGACCCAA
CAGCAGCCGG CGCCGGTCAA GCGCTGA
|
|---|
| Protein sequence | MKTLNSTPRA DGFHMPAEWA PQTQVWMVWP ERPDNWRLGG KPAQAAHVTL AKAIARFEPV
TVAASAGQYE NARRQLDQPN IRVVEISNDD AWVRDTGPTF VINGHGEVRG VDWGFNAWGG
FDGGLYAPWN RDEELAAKVL EMERCQRYQT EGFVLEGGSI HVDGEGTVIT TEECLLNRNR
NPHLSREQIE AVLRDHLAVD TVVWLPDGLY NDETDGHVDN FCCYVRPGEV LLAWTDDSND
PNYARCHAAM DVLKNTRDAK GREFIVHKMP IPGPLYATAE ECAGVDQVAG SQERDPSVRL
AGSYVNFLIV NGGIIAPSFD DPADAEARAI LARIFPDHEV VMIPGRELLL GGGNIHCLTQ
QQPAPVKR
|
|---|
| |