| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0280 |
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| Symbol | |
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| ID | 5191183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 323332 |
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| End bp | 323877 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640584725 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_001265638 |
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| Protein GI | 148545536 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCA TCCCTACAGC AATCCCTGAA GTACTGATCA TCGAGCCAAA GGTGTTCGCT
GACAGCCGTG GTTTTTTCTT CGAGGCATTC AACGCCCGTG AGTTCTCACA GCAAACCGGC
GTGAACATGG AGTTCGTCCA GGACAACCAC TCGCGCTCCA TCAAGGGCGT GCTCCGTGGG
CTGCACTACC AGGTGGCAAA CACCCAGGGC AAGCTGGTGC GCGTGGTGCA CGGGGAGATC
CGCGATATCG CCGTGGACGT GCGCAAAAGC TCGCCAACAT TCGGCAAATG GGTCGCGGTG
CACCTGTCGG CCGACAACCA TCGCCAGCTG TGGGTTCCGC CTGGCTTCGC CCACGGGTTT
GCGGTGATGA GTGAATCGGC CGAGTTCCTC TACAAGACCA CCGACTACTA CAACCCGGGC
GCCGACCGCT GCATCCGCTG GGACGACCCG CAACTGGCCA TCGACTGGGG GCTGCAGCAG
CCTCCGCTGT TGTCGGACAA GGACAAGGTG GGCCTGCCAT TGGCAGAGGC GGAACTGCTG
CCTTAA
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| Protein sequence | MNIIPTAIPE VLIIEPKVFA DSRGFFFEAF NAREFSQQTG VNMEFVQDNH SRSIKGVLRG
LHYQVANTQG KLVRVVHGEI RDIAVDVRKS SPTFGKWVAV HLSADNHRQL WVPPGFAHGF
AVMSESAEFL YKTTDYYNPG ADRCIRWDDP QLAIDWGLQQ PPLLSDKDKV GLPLAEAELL
P
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