| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0276 |
|---|
| Symbol | |
|---|
| ID | 5192814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 318652 |
|---|
| End bp | 319470 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640584721 |
|---|
| Product | 3'(2'),5'-bisphosphate nucleotidase |
|---|
| Protein accession | YP_001265634 |
|---|
| Protein GI | 148545532 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase |
|---|
| TIGRFAM ID | [TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACC TGCAACTGAT GCACGAAGTG GTCAAGCTGG CGCTGACGGC AGGCGAGGCG
ATCCTGCCAT TCTGGCGCGC CGATGTCGCG GTAACCAACA AGGCCGACGA TTCGCCGGTT
ACCGCCGCCG ACCTGGCCGC GCACCGGGTA ATTGCCGATG GTCTGCTGGC GCTGGCGCCG
CAGATTCCGG TGCTGTCCGA AGAGGACTGC AATATTGCGC TGGCCGAGCG GCAAAGCTGG
AGCCGCTGGT GGCTGGTCGA TCCGCTGGAT GGCACCAAGG AATTCATTGC CGGCAGTGAA
GAGTTCACGG TCAACATCGC CCTGATCGAG AACGGCGAGG TGGTGTTTGG CGTGGTGTCG
ATGCCCACCA ATGGGCGCTG CTATTTTGGT GGGCGCGGCA TGGGGGCCTG GCGTGCAGAT
GCCGGTGAGG CAGCCCAGCT GATCCAAGTA CGCAACGCAC CCGCGCAGGG CGAGCGTTTT
ACCGTGGTGG CCAGCCGTCG GCATTCCAGC CCGGAGCAGG AAGCGCTGTT GGCCGGCCTT
GGGGCTGCGG TGGGCGAGCT GGAGCTGGCC AATATTGGCA GCTCGTTGAA GTTCTGCCTG
TTGGCCGAGG GCAGCGCCGA TTGTTATCCG CGCCTGGCGC CGACTTCGCA GTGGGATACT
GCTGCGGCGC AGGGTGTGGT GGAGGGGGCC GGTGGCGAAG TGATCGGGCT GGATGGCTTG
CCGTTCCGGT ATCCACCGCG CGAGTCGCTG CTCAATCCGC ATTTCCTGGC ATTGCCTGCC
AATGCTGCAT GGCGCCAGGC CTTCCTGAAC CTCATCTAA
|
|---|
| Protein sequence | MNDLQLMHEV VKLALTAGEA ILPFWRADVA VTNKADDSPV TAADLAAHRV IADGLLALAP
QIPVLSEEDC NIALAERQSW SRWWLVDPLD GTKEFIAGSE EFTVNIALIE NGEVVFGVVS
MPTNGRCYFG GRGMGAWRAD AGEAAQLIQV RNAPAQGERF TVVASRRHSS PEQEALLAGL
GAAVGELELA NIGSSLKFCL LAEGSADCYP RLAPTSQWDT AAAQGVVEGA GGEVIGLDGL
PFRYPPRESL LNPHFLALPA NAAWRQAFLN LI
|
|---|
| |