| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0274 |
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| Symbol | |
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| ID | 5190295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 317362 |
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| End bp | 318024 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640584719 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001265632 |
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| Protein GI | 148545530 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGTTC TTCCCTGGTC TGCCATCGAT ACCGTCCTGC TGGACATGGA TGGCACCCTG
CTCGACCTGC ATTACGACAA CCGCTTCTGG CTGGACCACC TGCCCCAGCG CTATGCCGAG
CTGCACGGTG TAAGCCGGGC CATGGCGGAA ATGGAGCTGC AACCACTGTT CGAACGCAAT
GCCGGCACAT TGAACTGGTA CTGCCTGGAC TTCTGGAGCC GCGAGCTACG CCTGCCGATT
CGCGAGCTGA AGCGGGAAAT TGCCGACCTG ATTGCCCTGC GCCCGGATGC CGATACCTTC
CTGGCGGCGA TTCGCCAGGC CGGCAAGCGT GTCGTGATGA TCACCAATGC CCACCGTGAC
TCGCTGTCGC TGAAGCTGGA ACGGGTGGAG CTGGCACCGT ACTTCGAGCG GCTGATCAGC
TCGCACGACT ATGGCTACCC GAAGGAAAGC CCGCAGTTCT GGGATGCCCT GCAGGCGGAT
ATCGGCTTCG AACCAGAACG CAGCCTGTTC ATTGATGACA CGCTGGCGAT TCTGCGCAGT
GCACGGCGGT TTGGTGTGGG GCACTTGCTG GCGGTGCGCC AGCCAGATAG CAAAGCAGGG
CCGCGGGATA CTGAAGAGTT TGCGGCGGTC GAGGATTACC GGGAGTTACT GGTAGGCCTA
TGA
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| Protein sequence | MPVLPWSAID TVLLDMDGTL LDLHYDNRFW LDHLPQRYAE LHGVSRAMAE MELQPLFERN
AGTLNWYCLD FWSRELRLPI RELKREIADL IALRPDADTF LAAIRQAGKR VVMITNAHRD
SLSLKLERVE LAPYFERLIS SHDYGYPKES PQFWDALQAD IGFEPERSLF IDDTLAILRS
ARRFGVGHLL AVRQPDSKAG PRDTEEFAAV EDYRELLVGL
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