Gene Pput_0269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0269 
Symbol 
ID5192375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp312277 
End bp312717 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content64% 
IMG OID640584714 
Productthioesterase superfamily protein 
Protein accessionYP_001265627 
Protein GI148545525 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAG CCCCTCAGCG CACTGCCTTC TCCCACTTCC ACCCGATCCT CACCCGCCCC 
CAGGACAACG ACCTGAACGG CCACATCGCC GGTGCAACGG TGCACGGTTT TTTTGAAACC
GCGATCCAGG CGTTTCTCGT CGAGCAGGCT GAACTGGACC TGCGGCACGG TGAACTGGCC
GCCTTCGTGG TCAGTTCGGC TGCGGATTTC TACGCGCTAC CGGGCTTCCC GGATTTGTTG
GAGGTGGGGT TGGGAGTGAC GCGTCTGGCG GGCAGCACGG TAGAGTACCG GCTGGCGCTG
TATCGCCCGG GCGAACCGGA GGCGTGCGCA GCAGGCACGG TAGTGCAGGT GTTCATCGAA
CGCGACAGTG GCCGGCCTGT GGCGTTGCCA GAGGCGCTGC AGGTTATCCT GTCCGGCCTC
ATGCTGGAGC GGCAGGCATA A
 
Protein sequence
MTEAPQRTAF SHFHPILTRP QDNDLNGHIA GATVHGFFET AIQAFLVEQA ELDLRHGELA 
AFVVSSAADF YALPGFPDLL EVGLGVTRLA GSTVEYRLAL YRPGEPEACA AGTVVQVFIE
RDSGRPVALP EALQVILSGL MLERQA