Gene Pput_0265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0265 
Symbol 
ID5190213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp308031 
End bp308432 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content64% 
IMG OID640584710 
ProductRNA-binding S4 domain-containing protein 
Protein accessionYP_001265623 
Protein GI148545521 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.664213 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAAA AAGCCGAAGA CGACGACAAG GTTCGCCTGG ACAAATGGTT GTGGGCGGCG 
CGCTTCTACA AGACGCGAGC GCTGGCCAAG GCGGCGATCG AGAGTGGCAA GGTGCATTGC
CGGGGCGAGC GTTGCAAGCC GGGCAAAGAG CCGCGGGTGG GCGACGAGTT CGTGCTGCGT
ACCGGCTTCG ATGAGCGCAC GGTGGTGGTG AAGGCGCTGT CGGTGGTGCG TCGTGGTGCC
CCAGAGGCGC AGGCGTTGTA CGAGGAAACC GAAGAAAGTG TGCGTCGCCG TGAACAGGCG
GCTGAGATGC GTAAGGCCGG GGCCATGGGC GTGACCACCG ATGGCCGGCC GACCAAGAAG
CAGCGGCGGC AGATTCACCA GCTGCATGGA AGTTACGATT GA
 
Protein sequence
MAQKAEDDDK VRLDKWLWAA RFYKTRALAK AAIESGKVHC RGERCKPGKE PRVGDEFVLR 
TGFDERTVVV KALSVVRRGA PEAQALYEET EESVRRREQA AEMRKAGAMG VTTDGRPTKK
QRRQIHQLHG SYD