Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0258 |
Symbol | |
ID | 5191953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 299716 |
End bp | 301308 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640584703 |
Product | glutamate--cysteine ligase |
Protein accession | YP_001265616 |
Protein GI | 148545514 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2918] Gamma-glutamylcysteine synthetase |
TIGRFAM ID | [TIGR01434] glutamate--cysteine ligase [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.358158 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0162786 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGGAAT ACATCTTGAG CGAACTCCTC AACCGCCGCC TGAGCCTGCT CGGCGCCAAT CTCCCCCTGC TCAAGCAGTG CCTGCACGGT ATTGAGCGCG AATGCCTGCG CGTGACCGAT GAAGGTCGCC TGGCCCAGAC CCCGCATCCG GAAGCACTGG GATCGGCGCT GACCAACGAG CAGATCACCA CCGACTATTC CGAGTCGCTG CTGGAGTTCA TCACCCCAGC CCTGGCCGAT CCGGCCAAGG TGCTCGAAAG CCTCGAAGAG ACCCACCGTT TCGTCTACAG CAAGCTGGGC GACGAATACC TGTGGAGCCC GTCGATGCCG TGCACGCTGC CGGCCGAGGA GGACATCCCG ATCGCCGAGT ACGGCAGCTC GAATATCGGC AAGCTCAAAC ACGTCTACCG CAAGGGCCTG GCCCTGCGTT ACGGCCGCAC CATGCAGTGC ATCGCCGGTA TTCATTACAA CTTCTCGCTG CCCGAAGCGC TTTGGCCACT GCTGCGCGAA GCCGAAGGCA GTACGGAAAA TGACCGCGAC TACCAGTCGT CGGCCTACAT CGCGCTGATT CGTAACTTCC GCCGCTACAG CTGGCTGCTG ATGTACCTGT TCGGCGCCTC GCCGGCCCTG GACAAAGGCT TCCTGCGTGG CCGCCCGCAC CAGCTCGAAG AGCTGGATGC CGAAACCCTG TTCCTGCCTT ATGCCACCAG CCTGCGCATG AGCGACCTGG GTTACCAGAG CAACGCCCAG GCCGGCCTGA CGCCCTGCTA CAACAACCTG GCCAGCTACA CCGACAGCCT GCGCAAGGCC GTTGGCACGC CCTACCCGCC TTACGTTGAA ATCGGCACGC ATGTGGATGG CGAGTGGGTT CAGCTGAACA CCAACATTCT GCAGATCGAA AACGAGTACT ACTCGAACAT CCGCCCCAAG CGCGTCACCT ACACCGGCGA GCGGCCGATC CAGGCCCTGA CCTCGCGGGG CGTGCAGTAT GTGGAAGTGC GTTGCCTGGA CATCAACCCG TTTCTGCCGG TCGGTATCGA CCTGACCGAG GCGCGCTTCC TCGACGCATT CCTGCTGTTC TGCGCCTTGG AAGACAGCCC GCAACTGGAC AACGGTGAGT GCGGCCAGTG CACCAGCAAC TTCCTGACCG TGGTCAAGGA AGGTCGTCGT CCGGGCCTGG AGTTGCACCG CAATGGCCAG CCGATCAGCC TGAAAGACTG GGCCAGCGAG CTGATCGAGC GTATCCGCCA ATTGGCCAAT CTGCTCGACC AGGCGCAAGG TTCTGATGAG CACGCCAAGG CCCTGGATGC GCAGCAGGCC AAGGTCGACG ACACCTCGCT GACCCCGTCG GCCCAGGTGC TGGCACGCAT GACCGAGCAT GACGAGAGTT TCGTCCAGTT CTCGCTGCGC CAGAGCCGTG TGCACGCCGA GACTTTCCGC GAGCAACCGC TGAGCAACGA AAAGCAGCAA GCATTCGAGA CGCTGGCCCG CGAGTCGCTC GCCAGGCAGT CCGAGCTGGA GCGAGACGAA GTCGGTGATT TCGACTTGTT CGTCGGCGCC TACCAGGCCA GCATCCTGGC AATCAGCAGC TGA
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Protein sequence | MKEYILSELL NRRLSLLGAN LPLLKQCLHG IERECLRVTD EGRLAQTPHP EALGSALTNE QITTDYSESL LEFITPALAD PAKVLESLEE THRFVYSKLG DEYLWSPSMP CTLPAEEDIP IAEYGSSNIG KLKHVYRKGL ALRYGRTMQC IAGIHYNFSL PEALWPLLRE AEGSTENDRD YQSSAYIALI RNFRRYSWLL MYLFGASPAL DKGFLRGRPH QLEELDAETL FLPYATSLRM SDLGYQSNAQ AGLTPCYNNL ASYTDSLRKA VGTPYPPYVE IGTHVDGEWV QLNTNILQIE NEYYSNIRPK RVTYTGERPI QALTSRGVQY VEVRCLDINP FLPVGIDLTE ARFLDAFLLF CALEDSPQLD NGECGQCTSN FLTVVKEGRR PGLELHRNGQ PISLKDWASE LIERIRQLAN LLDQAQGSDE HAKALDAQQA KVDDTSLTPS AQVLARMTEH DESFVQFSLR QSRVHAETFR EQPLSNEKQQ AFETLARESL ARQSELERDE VGDFDLFVGA YQASILAISS
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