| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0255 |
|---|
| Symbol | ssuB |
|---|
| ID | 5191603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 297886 |
|---|
| End bp | 298698 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640584700 |
|---|
| Product | aliphatic sulfonates transport ATP-binding subunit |
|---|
| Protein accession | YP_001265613 |
|---|
| Protein GI | 148545511 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.213675 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0453993 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTGC TCAAGGAACA GCCACCACGC CTGCTGCGTG GCACCCCGCT GGCCTCCAAG
GGCCTGCGCA AGACTTTTGG TCAACGCGAA GTTCTGAAGG GTATCGACCT GCACATTCCG
GCCGGCCAGT TCGTGGCCAT CGTCGGCCGC AGCGGCTGCG GCAAGAGCAC TTTGCTGCGG
CTACTGGCCG GGTTGGACCA GCCCACTGCC GGGCAGCTAC TGGCGGGTGC CGCGCCGCTG
GAAGAGGCCC GTGAAGAAAC CCGCCTGATG TTCCAGGACG CGCGGCTGCT GCCGTGGAAG
AAGGTGATCG ACAACGTTGG CCTTGGGCTG TCTGGCGACT GGCGCCCGCG TGCGCTGGAG
GCCTTGGATG CGGTTGGCCT GGCCGACCGC GCCAACGAAT GGCCGGCAGC GCTCTCGGGA
GGCCAGAAGC AGCGCGTGGC TTTGGCCCGA GCCTTGATTC ACCAGCCCCG CCTGCTGCTG
CTGGACGAGC CACTGGGGGC GCTGGATGCA TTGACCCGTA TCGAGATGCA GCAACTGATC
GAACGCCTGT GGCGTCAGCA CGGCTTCACT GTGCTGCTGG TCACCCACGA CGTCAGCGAG
GCGGTTGCCG TGGCTGACCG GGTGATCCTG ATTGAGGACG GCGAGGTCGG GCTCGACCTC
ACTGTTGACC TGGCACGGCC CCGGGCGCGT GGTTCGCACC GTCTGGCCGC GCTGGAAAGC
GAAGTGCTCA ACCGTGTTCT GTCCACCCCG GGCACTGCGC CCGAGCCGGA TCCTGTAGCC
CCTCTGCCCA CGCAACTGCG CTGGGCGCAC TGA
|
|---|
| Protein sequence | MTVLKEQPPR LLRGTPLASK GLRKTFGQRE VLKGIDLHIP AGQFVAIVGR SGCGKSTLLR
LLAGLDQPTA GQLLAGAAPL EEAREETRLM FQDARLLPWK KVIDNVGLGL SGDWRPRALE
ALDAVGLADR ANEWPAALSG GQKQRVALAR ALIHQPRLLL LDEPLGALDA LTRIEMQQLI
ERLWRQHGFT VLLVTHDVSE AVAVADRVIL IEDGEVGLDL TVDLARPRAR GSHRLAALES
EVLNRVLSTP GTAPEPDPVA PLPTQLRWAH
|
|---|
| |