Gene Pput_0250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0250 
Symbol 
ID5190631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp293372 
End bp294010 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content59% 
IMG OID640584695 
Productperoxidase 
Protein accessionYP_001265608 
Protein GI148545506 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.024588 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.253969 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCA AACTCGGCGA TATCGCCCCC GATTTCGAAC AGGATTCCAG CGAAGGCAAG 
ATCCGCTTCC ACGAGTGGCT GGGCAACAGC TGGGGGGTGT TGTTCTCCCA CCCGGCCGAC
TTCACCCCGG TGTGCACCAC CGAGTTGGGC CTGACCGCCA AGCTGAAGGA CGAATTTGCC
AAGCGCGGGG TCAAGGCCAT CGCCCTGTCG GTGGACCCGG TCGACTCGCA TCACAAGTGG
ATCGATGACA TCAACGAAAC ACAGAATACC GTGGTCAACT TCCCGATCAT TGCTGACGCT
GACCGCAAAG TGTCCGACCT TTACGACCTG ATCCACCCGA ACGCCAGCGA CACCCTGACC
GTGCGCTCGC TGTTCATCAT CGACCCGAAT AAAAAGGTGC GCCTGACCAT TACCTACCCG
GCCAGTACCG GGCGCAACTT CAACGAAATT CTGCGGGTGA TCGACTCGCT GCAGCTGACC
GACAACCACA AGGTTGCCAC ACCGGGTAAC TGGCAGGACG GCGATGAAGT GGTGATCGTG
CCTTCGCTCA AAGACGAGGA GGAGATCAAG CAGCGCTTCC CCAAAGGTTA CCGGGCGGTC
AAACCCTATC TGCGCCTGAC CCCTCAACCC AATCGTTAA
 
Protein sequence
MSLKLGDIAP DFEQDSSEGK IRFHEWLGNS WGVLFSHPAD FTPVCTTELG LTAKLKDEFA 
KRGVKAIALS VDPVDSHHKW IDDINETQNT VVNFPIIADA DRKVSDLYDL IHPNASDTLT
VRSLFIIDPN KKVRLTITYP ASTGRNFNEI LRVIDSLQLT DNHKVATPGN WQDGDEVVIV
PSLKDEEEIK QRFPKGYRAV KPYLRLTPQP NR