Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0247 |
Symbol | tauB |
ID | 5194390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 289574 |
End bp | 290362 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640584692 |
Product | taurine transporter ATP-binding subunit |
Protein accession | YP_001265605 |
Protein GI | 148545503 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4525] ABC-type taurine transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.09148 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.145394 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCTTGC TCGAGCTGGA GCGCATCAGC GCACAGTACC CAGGCGCCAG CACCCCGGTG CTGGCCGACA TCAACCTGAG CCTGGGACCA CGCCAACTGC TGGTGGCCCT GGGGCCTTCC GGCAGCGGCA AGACCTCACT GCTCAACCTG ATCGCCGGCT TCGTCGCCCC CAGTGGCGGT GACATCACCC TCGATGGTGT GCCGGTGCAG GGCCCCGGTG CAGAACGCGG CGTGGTGTTC CAGGACGATG CCCTGCTGCC ATGGCAGAAC GTGCTGGGCA ACGTCGCCTT CGGCCTCGAA CTGGCTGGCG TACCCCGCGC CCAGCGTGAG GCCAAGGCCC GCGAAATGCT CACCCTGGTC GACCTCGATG GCTTCGGCGA ACGGCGTATC TGGCAATTGT CCGGTGGCCA GAAGCAGCGC GTGGGCCTTG CCCGGGCGCT GGCGGCTGCC CCTCGGGTAC TGCTGATGGA TGAACCGTTC GGTGCCCTCG ATGCCTTCAC CCGTGAGCAG ATGCAAGAGC TGCTATTGCA AGTTTGGCAA CGCACCGCCA AGCCGGTGTT CCTGATTACC CACGACATCG AAGAAGCGGT GTTCCTCGCC AGCGAACTGG TACTGCTGGC GCCCAACCCG GGACGCGTAG TGGAACGCCT GCAGCTGAAC TTCGGCCAGC GCTATGCCGC TGGCGAATCG GCCCGGGCCA TCAAGTCCGA TCCAGCCTTC ATCGAAACCC GCGAGCATGT GCTGGCGCGG GTGTTTTCCC AACGCCAAAG CCTGCAGGAG CGCGCATGA
|
Protein sequence | MALLELERIS AQYPGASTPV LADINLSLGP RQLLVALGPS GSGKTSLLNL IAGFVAPSGG DITLDGVPVQ GPGAERGVVF QDDALLPWQN VLGNVAFGLE LAGVPRAQRE AKAREMLTLV DLDGFGERRI WQLSGGQKQR VGLARALAAA PRVLLMDEPF GALDAFTREQ MQELLLQVWQ RTAKPVFLIT HDIEEAVFLA SELVLLAPNP GRVVERLQLN FGQRYAAGES ARAIKSDPAF IETREHVLAR VFSQRQSLQE RA
|
| |