Gene Pput_0247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0247 
SymboltauB 
ID5194390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp289574 
End bp290362 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID640584692 
Producttaurine transporter ATP-binding subunit 
Protein accessionYP_001265605 
Protein GI148545503 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4525] ABC-type taurine transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.09148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.145394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTGC TCGAGCTGGA GCGCATCAGC GCACAGTACC CAGGCGCCAG CACCCCGGTG 
CTGGCCGACA TCAACCTGAG CCTGGGACCA CGCCAACTGC TGGTGGCCCT GGGGCCTTCC
GGCAGCGGCA AGACCTCACT GCTCAACCTG ATCGCCGGCT TCGTCGCCCC CAGTGGCGGT
GACATCACCC TCGATGGTGT GCCGGTGCAG GGCCCCGGTG CAGAACGCGG CGTGGTGTTC
CAGGACGATG CCCTGCTGCC ATGGCAGAAC GTGCTGGGCA ACGTCGCCTT CGGCCTCGAA
CTGGCTGGCG TACCCCGCGC CCAGCGTGAG GCCAAGGCCC GCGAAATGCT CACCCTGGTC
GACCTCGATG GCTTCGGCGA ACGGCGTATC TGGCAATTGT CCGGTGGCCA GAAGCAGCGC
GTGGGCCTTG CCCGGGCGCT GGCGGCTGCC CCTCGGGTAC TGCTGATGGA TGAACCGTTC
GGTGCCCTCG ATGCCTTCAC CCGTGAGCAG ATGCAAGAGC TGCTATTGCA AGTTTGGCAA
CGCACCGCCA AGCCGGTGTT CCTGATTACC CACGACATCG AAGAAGCGGT GTTCCTCGCC
AGCGAACTGG TACTGCTGGC GCCCAACCCG GGACGCGTAG TGGAACGCCT GCAGCTGAAC
TTCGGCCAGC GCTATGCCGC TGGCGAATCG GCCCGGGCCA TCAAGTCCGA TCCAGCCTTC
ATCGAAACCC GCGAGCATGT GCTGGCGCGG GTGTTTTCCC AACGCCAAAG CCTGCAGGAG
CGCGCATGA
 
Protein sequence
MALLELERIS AQYPGASTPV LADINLSLGP RQLLVALGPS GSGKTSLLNL IAGFVAPSGG 
DITLDGVPVQ GPGAERGVVF QDDALLPWQN VLGNVAFGLE LAGVPRAQRE AKAREMLTLV
DLDGFGERRI WQLSGGQKQR VGLARALAAA PRVLLMDEPF GALDAFTREQ MQELLLQVWQ
RTAKPVFLIT HDIEEAVFLA SELVLLAPNP GRVVERLQLN FGQRYAAGES ARAIKSDPAF
IETREHVLAR VFSQRQSLQE RA