Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0235 |
Symbol | |
ID | 5193872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 275827 |
End bp | 276936 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640584680 |
Product | ABC transporter related |
Protein accession | YP_001265593 |
Protein GI | 148545491 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1135] ABC-type metal ion transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.472278 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGG CCAGCGCGCT CAGGGCGCCT ACACCCCAAG CACTGCCGCC TATAGCCAAG GAACAGGCCC TGCGCCCCGA GGTCAATGAA GCCCACGTGC GCTTCATCGG CCTGGGCAAG ACCTACCCGG GCCAGGCGCA ACCGGCCTTG CAAGGCATCG ACTTGAACAT CCGCCATGGC GAGATCTTCG GCATCATCGG CCGCAGCGGC GCCGGTAAGT CATCACTGCT GCGCACCATC AACCGCCTGG AGCAACCCAG CCAGGGCCGC GTATTGATCG ACCAGGTGGA TATCGCGCCT TTCGATGAGG ACCAGCTTGT GGCCCTGCGC CGGCGCATCG GCATGATCTT CCAGCACTTC AACCTGATGT CGGCCAAGAC CGTGTGGCAG AACGTCGAAT TGCCGTTGAA AGTCGCCGGC GTGGCAAAAG CCGAACGCCA GCGCAAGGTG CGCGAGTTGC TGGAACTGGT CGGCCTGCAG GAAAAACATC ACGTGTACCC GGCGCAACTG TCCGGCGGGC AGAAACAGCG CGTGGGCATT GCCCGGGCAC TGGTGCACAC CCCCGAGATC CTGCTGTGCG ACGAGGCCAC CTCGGCGCTG GACCCGGAAA CCACCGCCTC GATCCTGGAG CTGCTGCGCG ATATCAACCA GCGCCTGGGG CTGACCATCG TGCTGATCAC CCACGAAATG GCGGTGATTC GCGACATCTG CCACCGGGTT GTGGTGCTGG AACGCGGCGC AGTGGTCGAG CAGGGCGAGG TCTGGCGGGT GTTTGGTTCA CCTCGTCACG AGGTTACCCG CACCCTGCTC GCCCCTTTGC AGGCCAAGCT ACCCGCCGCA CTGCAAGCCA GCCTCCAGGC CCACCCGGCG AGCGGCAACA GCGCCGTAGT GCTGAAACTG ACGGTGCTTG GCGAGCCAGA GCTGTCTGCC CTGTTCAACG ACCTGGGCGG GCGTGTGCGT CTGCTGCAGG GCGGCGTGGA AACCATCGGC GAACATGCCT TGGGGCAACT CATCCTCTCG GTGCAACACT CGCCGCACGA CACCCATCAA TTGCTGGAAC GTGCCCGCCG TTGGGCCGAG GACGTGGAGG TATTGGGCCA TGTGGTTTGA
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Protein sequence | MSQASALRAP TPQALPPIAK EQALRPEVNE AHVRFIGLGK TYPGQAQPAL QGIDLNIRHG EIFGIIGRSG AGKSSLLRTI NRLEQPSQGR VLIDQVDIAP FDEDQLVALR RRIGMIFQHF NLMSAKTVWQ NVELPLKVAG VAKAERQRKV RELLELVGLQ EKHHVYPAQL SGGQKQRVGI ARALVHTPEI LLCDEATSAL DPETTASILE LLRDINQRLG LTIVLITHEM AVIRDICHRV VVLERGAVVE QGEVWRVFGS PRHEVTRTLL APLQAKLPAA LQASLQAHPA SGNSAVVLKL TVLGEPELSA LFNDLGGRVR LLQGGVETIG EHALGQLILS VQHSPHDTHQ LLERARRWAE DVEVLGHVV
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